RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 PPM1KQ8N3J5 372 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 BANPQ8N9N5 519 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 FBXL13Q8NEE6 735 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 DNAJB3Q8WWF6 145 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 HERVK_113Q902F9 699 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 ZNF184Q99676 751 aaPredicted RBP10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PAIP2Q9BPZ3 127 aaKnown RBP10.76□□□□□ -0.69
UPF3B-201ENST00000276201 CBWD1Q9BRT8 395 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 FAM49AQ9H0Q0 323 aaPredicted RBP10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PCDH9Q9HC56 1237 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 DNAJC17Q9NVM6 304 aaKnown RBP10.76□□□□□ -0.69
UPF3B-201ENST00000276201 SCINQ9Y6U3 715 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 SIP14410 1827 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 E7ESA3 106 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 FGBP02675 491 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 ITGAVP06756 1048 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 ADRB2P07550 413 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 QARSP47897 775 aaKnown RBP10.76□□□□□ -0.69
UPF3B-201ENST00000276201 CACNA2D1P54289 1103 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 MGAT3Q09327 533 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 HNRNPDQ14103 355 aaKnown RBP10.76□□□□□ -0.69
UPF3B-201ENST00000276201 TBCCQ15814 346 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 MAPK6Q16659 721 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 TCTN1Q2MV58 587 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PLEKHG4Q58EX7 1191 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 XKR3Q5GH77 459 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PLEKHA7Q6IQ23 1121 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 RFWD3Q6PCD5 774 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 DSTYKQ6XUX3 929 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 OTOP2Q7RTS6 562 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PHF13Q86YI8 300 aaPredicted RBP10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PWWP2AQ96N64 755 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 LXNQ9BS40 222 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 NRBP2Q9NSY0 501 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 ARL8BQ9NVJ2 186 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 RAB20Q9NX57 234 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 CHORDC1Q9UHD1 332 aaPredicted RBP10.76□□□□□ -0.69
UPF3B-201ENST00000276201 SSX2IPQ9Y2D8 614 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PCDHB2Q9Y5E7 798 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 LAMA3Q16787 3333 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 SMIM35A0A1B0GVV1 85 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 GYG2O15488 501 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 PARNO95453 639 aaKnown RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 CHRNA1P02708 482 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 P4HBP07237 508 aaKnown RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 FGFR1P11362 822 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 TARBP2Q15633 366 aaKnown RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 OASLQ15646 514 aaKnown RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 FOXB2Q5VYV0 432 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 RDH13Q8NBN7 331 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 MAK16Q9BXY0 300 aaKnown RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 NIFKQ9BYG3 293 aaKnown RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 ACSS3Q9H6R3 686 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 MANSC1Q9H8J5 431 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 ZDHHC7Q9NXF8 308 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 CXXC1Q9P0U4 656 aaPredicted RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 SEPT9Q9UHD8 586 aaPredicted RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 RABGEF1Q9UJ41 708 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 EFR3BQ9Y2G0 817 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 CAPN9O14815 690 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 ZBTB39O15060 712 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 MAP3K13O43283 966 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 TBX10O75333 385 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 PENKP01210 267 aaPredicted RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 NEK3P51956 506 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 ARFIP2P53365 341 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 VCPP55072 806 aaKnown RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 MRPS6P82932 125 aaKnown RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 XIAPP98170 497 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 SLC18A2Q05940 514 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 C1QBPQ07021 282 aaKnown RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 TRMT5Q32P41 509 aaKnown RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 C15orf39Q6ZRI6 1047 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 ANO5Q75V66 913 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 HAUS6Q7Z4H7 955 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 RSPH3Q86UC2 560 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 KIAA0319LQ8IZA0 1049 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 ATP11CQ8NB49 1132 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 STKLD1Q8NE28 680 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 UCMAQ8WVF2 138 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 APBB2Q92870 758 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 STMN2Q93045 179 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 VCX3BQ9H321 246 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 PCIF1Q9H4Z3 704 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 KCNK13Q9HB14 408 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 VCX3AQ9NNX9 186 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 NPHS2Q9NP85 383 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
UPF3B-201ENST00000276201 ARID2Q68CP9 1835 aa10.75□□□□□ -0.69
UPF3B-201ENST00000276201 H0Y3Z8 333 aa10.74□□□□□ -0.69
UPF3B-201ENST00000276201 KRT36O76013 467 aa10.74□□□□□ -0.69
UPF3B-201ENST00000276201 CRABP2P29373 138 aa10.74□□□□□ -0.69
UPF3B-201ENST00000276201 SSR1P43307 286 aaKnown RBP10.74□□□□□ -0.69
UPF3B-201ENST00000276201 NFX1Q12986 1120 aaKnown RBP10.74□□□□□ -0.69
UPF3B-201ENST00000276201 PRKD1Q15139 912 aaPredicted RBP10.74□□□□□ -0.69
UPF3B-201ENST00000276201 SNRNP35Q16560 246 aaKnown RBP10.74□□□□□ -0.69
UPF3B-201ENST00000276201 MTERF2Q49AM1 385 aa10.74□□□□□ -0.69
UPF3B-201ENST00000276201 TMCO4Q5TGY1 634 aa10.74□□□□□ -0.69
UPF3B-201ENST00000276201 PLA2G4FQ68DD2 849 aa10.74□□□□□ -0.69
UPF3B-201ENST00000276201 FAM109BQ6ICB4 259 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms