RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 C11orf74Q86VG3 221 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 TSEN34Q9BSV6 310 aaKnown RBP8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 PHACTR1Q9C0D0 580 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 COPS7BQ9H9Q2 264 aaPredicted RBP8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 SORCS3Q9UPU3 1222 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 ANKRD6Q9Y2G4 727 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 TMA7Q9Y2S6 64 aaKnown RBP8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 EFCAB10A6NFE3 127 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 FCHO1O14526 889 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 ATMINO43313 823 aaPredicted RBP8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 IGKV5-2P06315 115 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 GARTP22102 1010 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 TGM3Q08188 693 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 ZNF543Q08ER8 600 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 AGKQ53H12 422 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 EXOC3L1Q86VI1 746 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 CHSY1Q86X52 802 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 CACTIN-AS1Q8N1I8 211 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 UBASH3BQ8TF42 649 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 KATNAL1Q9BW62 490 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 WDR41Q9HAD4 459 aa8.96□□□□□ -0.97
SCUBE3-201ENST00000274938 PIK3CDO00329 1044 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ALDH1A2O94788 518 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 MYL12AP19105 171 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 RPA1P27694 616 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 HARS2P49590 506 aaKnown RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 STX4Q12846 297 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 SFSWAPQ12872 951 aaKnown RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 CUL2Q13617 745 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 YTHDF3Q7Z739 585 aaKnown RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 CCDC33Q8N5R6 958 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 SLC44A5Q8NCS7 719 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 HPS4Q9NQG7 708 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 THAP1Q9NVV9 213 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ECDO95905 644 aaPredicted RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 CSE1LP55060 971 aaKnown RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 PGS1Q32NB8 556 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 Q4G0T1 1027 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 DCAF6Q58WW2 860 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 EPHA10Q5JZY3 1008 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ATF7IP2Q5U623 682 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 C11orf63Q6NUN7 778 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 TSHZ1Q6ZSZ6 1077 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 DENND5BQ6ZUT9 1274 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 FAM228AQ86W67 206 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 STARD8Q92502 1023 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ASB2Q96Q27 587 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ZFYVE1Q9HBF4 777 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ADPRHL2Q9NX46 363 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 NYAP2Q9P242 653 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 DYRK3O43781 588 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 CNPP09543 421 aaKnown RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 EPB42P16452 691 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ITGALP20701 1170 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ERVK-24P63145 666 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 DALRD3Q5D0E6 543 aaKnown RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 KIAA0408Q6ZU52 694 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ULK2Q8IYT8 1036 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 CENPIQ92674 756 aaPredicted RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 APOPT1Q96IL0 206 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 DCUN1D5Q9BTE7 237 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 OSBPL6Q9BZF3 934 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 EPB41L4AQ9HCS5 686 aaPredicted RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 DDX18Q9NVP1 670 aaKnown RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 TNFRSF21O75509 655 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 PAX7P23759 505 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 IFNGR2P38484 337 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 CDK7P50613 346 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 PHKG1Q16816 387 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ANKS6Q68DC2 871 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 CRELD2Q6UXH1 353 aaPredicted RBP8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF605Q86T29 641 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 CD302Q8IX05 232 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 WRNIP1Q96S55 665 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 NDUFAF1Q9Y375 327 aa8.96□□□□□ -0.98
SCUBE3-201ENST00000274938 TRIM43BA6NCK2 446 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 H3BQF6 201 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 GSTM1P09488 218 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 TSPAN19P0C672 248 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 PSMD4P55036 377 aaKnown RBP8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 ALFQ53S48 1182 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 POP5Q969H6 163 aaKnown RBP8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 SLC25A23Q9BV35 468 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 KIFC1Q9BW19 673 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 PCDH9Q9HC56 1237 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 GTF2A1LQ9UNN4 478 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 CPSF4O95639 269 aaKnown RBP8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 CRTAMO95727 393 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 LSM8O95777 96 aaKnown RBP8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 CHN2P52757 468 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 CAMK2GQ13555 558 aaPredicted RBP8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 SMTNL2Q2TAL5 461 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 GRTP1Q5TC63 336 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 IER5Q5VY09 327 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 SPOCD1Q6ZMY3 1216 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 STOX1Q6ZVD7 989 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 TTLL6Q8N841 843 aa8.95□□□□□ -0.98
SCUBE3-201ENST00000274938 DAGLBQ8NCG7 672 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms