RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 VCPIP1Q96JH7 1222 aa15.12■□□□□ 0.01
CNOT9-201ENST00000273064 MRPL45Q9BRJ2 306 aaKnown RBP15.12■□□□□ 0.01
CNOT9-201ENST00000273064 SNRNP25Q9BV90 132 aaKnown RBP15.12■□□□□ 0.01
CNOT9-201ENST00000273064 DDX43Q9NXZ2 648 aaKnown RBP15.12■□□□□ 0.01
CNOT9-201ENST00000273064 SYNPO2Q9UMS6 1093 aa15.12■□□□□ 0.01
CNOT9-201ENST00000273064 MAP3K7O43318 606 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 GDF10P55107 478 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 POU6F1Q14863 301 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 HSP90AA5PQ58FG0 334 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 WSCD1Q658N2 575 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 PLEKHH3Q7Z736 793 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 C12orf56Q8IXR9 622 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 THEM5Q8N1Q8 247 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 AFAP1L2Q8N4X5 818 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 ZCCHC9Q8N567 271 aaKnown RBP15.11■□□□□ 0.01
CNOT9-201ENST00000273064 GSDMBQ8TAX9 411 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 ZNF75CPQ92670 426 aaPredicted RBP15.11■□□□□ 0.01
CNOT9-201ENST00000273064 TUBGCP4Q9UGJ1 667 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 COL18A1P39060 1754 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 MYO18AQ92614 2054 aaKnown RBP15.11■□□□□ 0.01
CNOT9-201ENST00000273064 TULP2O00295 520 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 GAS2O43903 313 aaKnown RBP15.11■□□□□ 0.01
CNOT9-201ENST00000273064 USP17L7P0C7H9 530 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 ANO4Q32M45 955 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 EFCAB3Q8N7B9 438 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 GABPB2Q8TAK5 448 aaPredicted RBP15.11■□□□□ 0.01
CNOT9-201ENST00000273064 TWNKQ96RR1 684 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 ELOVL4Q9GZR5 314 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 SLC17A7Q9P2U7 560 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 SIGLEC16A6NMB1 481 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 A8MUI8 341 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 KPNA7A9QM74 516 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 CD4P01730 458 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 MON1BQ7L1V2 547 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 CDC26Q8NHZ8 85 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 LMO3Q8TAP4 145 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 RMDN1Q96DB5 314 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 BORCS6Q96GS4 357 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 SEPT5Q99719 369 aaPredicted RBP15.11■□□□□ 0.01
CNOT9-201ENST00000273064 MYLK2Q9H1R3 596 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 CHST12Q9NRB3 414 aa15.11■□□□□ 0.01
CNOT9-201ENST00000273064 C3orf70A6NLC5 250 aaPredicted RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 RGS20O76081 388 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 ERVK-10P10266 1014 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 GBE1Q04446 702 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 DBN1Q16643 649 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 KIF19Q2TAC6 998 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 SPATA2LQ8IUW3 424 aaPredicted RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 FBXO6Q9NRD1 293 aaPredicted RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 FAM53CQ9NYF3 392 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 GRIN2DO15399 1336 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 CLGNO14967 610 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 PLA2G6O60733 806 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 ZFXP17010 805 aaPredicted RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 ZNF268Q14587 947 aaPredicted RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 C1orf220Q5T0J3 134 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 IFNEQ86WN2 208 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 FBXO41Q8TF61 875 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 PTPRN2Q92932 1015 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 TMA16Q96EY4 203 aaKnown RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 PARK7Q99497 189 aaKnown RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 TRIM56Q9BRZ2 755 aaKnown RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 WWP1Q9H0M0 922 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 PTPRHQ9HD43 1115 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 SHOC2Q9UQ13 582 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 BUD23O43709 281 aaKnown RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 SKIP12755 728 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 GOT1P17174 413 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 DRG2P55039 364 aaKnown RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 ACVR2BQ13705 512 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 PDCD2Q16342 344 aaPredicted RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 EFHC1Q5JVL4 640 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 TTC39BQ5VTQ0 682 aaPredicted RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 PHF13Q86YI8 300 aaPredicted RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 VPS39Q96JC1 886 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 SRPK1Q96SB4 655 aaKnown RBP15.1■□□□□ 0.01
CNOT9-201ENST00000273064 TMEM120AQ9BXJ8 343 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 SP110Q9HB58 689 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 SLC12A6Q9UHW9 1150 aa15.1■□□□□ 0.01
CNOT9-201ENST00000273064 E9PBE3 544 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 KLHL41O60662 606 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 NUDT17P0C025 328 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 SLC26A11Q86WA9 606 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 LRRC43Q8N309 656 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 EFHBQ8N7U6 833 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 GPR88Q9GZN0 384 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 IL1RL2Q9HB29 575 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 PRDM5Q9NQX1 630 aaPredicted RBP15.09■□□□□ 0.01
CNOT9-201ENST00000273064 STOML1Q9UBI4 398 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 MEI4A8MW99 385 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 CXCL11O14625 94 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 POLBP06746 335 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 CALRP27797 417 aaKnown RBP15.09■□□□□ 0.01
CNOT9-201ENST00000273064 ITGA9Q13797 1035 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 PDK1Q15118 436 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 SLC1A5Q15758 541 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 MGAT5BQ3V5L5 792 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 PIGZQ86VD9 579 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 SPATA24Q86W54 205 aa15.09■□□□□ 0.01
CNOT9-201ENST00000273064 TMEM134Q9H6X4 195 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms