RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 ATXN3LQ9H3M9 355 aa11.52□□□□□ -0.56
SFXN5-201ENST00000272433 DDX20Q9UHI6 824 aaKnown RBP11.52□□□□□ -0.56
SFXN5-201ENST00000272433 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.52□□□□□ -0.56
SFXN5-201ENST00000272433 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.56
SFXN5-201ENST00000272433 MYBPHLA2RUH7 354 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 CABYRO75952 493 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 F2P00734 622 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 PECAM1P16284 738 aaPredicted RBP11.52□□□□□ -0.57
SFXN5-201ENST00000272433 STIP1P31948 543 aaKnown RBP11.52□□□□□ -0.57
SFXN5-201ENST00000272433 PURAQ00577 322 aaKnown RBP11.52□□□□□ -0.57
SFXN5-201ENST00000272433 SH3PXD2AQ5TCZ1 1133 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 ITPRIPL1Q6GPH6 555 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 KCNT2Q6UVM3 1135 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 ZNF662Q6ZS27 426 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 TRMT10CQ7L0Y3 403 aaKnown RBP11.52□□□□□ -0.57
SFXN5-201ENST00000272433 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
SFXN5-201ENST00000272433 UNC93AQ86WB7 457 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 PPIL6Q8IXY8 311 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 MSL3Q8N5Y2 521 aaKnown RBP11.52□□□□□ -0.57
SFXN5-201ENST00000272433 LRRC52Q8N7C0 313 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 MAML1Q92585 1016 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 CYTH2Q99418 400 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 IPO11Q9UI26 975 aaKnown RBP11.52□□□□□ -0.57
SFXN5-201ENST00000272433 DNAJC25-GNG10A0A024R161 153 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 ARL5CA6NH57 179 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 IQCF3P0C7M6 154 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 CHN1P15882 459 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 FECHP22830 423 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 NDUFV1P49821 464 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 PRAMEP78395 509 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 KLHL38Q2WGJ6 581 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 MROH9Q5TGP6 573 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 FAM228AQ86W67 206 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 EFHBQ8N7U6 833 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 STKLD1Q8NE28 680 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 FBXO36Q8NEA4 188 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 MYLPFQ96A32 169 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 KCNK16Q96T55 309 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 PRMT1Q99873 361 aaKnown RBP11.52□□□□□ -0.57
SFXN5-201ENST00000272433 LBHD1Q9BQE6 289 aaPredicted RBP11.52□□□□□ -0.57
SFXN5-201ENST00000272433 TKTL2Q9H0I9 626 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 FLRT1Q9NZU1 646 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 BAIAP2L1Q9UHR4 511 aa11.52□□□□□ -0.57
SFXN5-201ENST00000272433 DDX60LQ5H9U9 1706 aaKnown RBP11.52□□□□□ -0.57
SFXN5-201ENST00000272433 SSTR1P30872 391 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 STAT4Q14765 748 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 PDK2Q15119 407 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 ZNF618Q5T7W0 954 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 LMO3Q8TAP4 145 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 MCUR1Q96AQ8 359 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 B3GALT6Q96L58 329 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 TBCBQ99426 244 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 TRIM62Q9BVG3 475 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 HIPK3Q9H422 1215 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 UBN1Q9NPG3 1134 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 RNF186Q9NXI6 227 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 KANSL3Q9P2N6 904 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 SRRDQ9UH36 339 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 BCORQ6W2J9 1755 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 ZNF449Q6P9G9 518 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 CLEC4CQ8WTT0 213 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 ZNF669Q96BR6 464 aaPredicted RBP11.51□□□□□ -0.57
SFXN5-201ENST00000272433 NUDCD1Q96RS6 583 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 MUC3BQ9H195 1237 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.51□□□□□ -0.57
SFXN5-201ENST00000272433 DONSONQ9NYP3 566 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 DSEQ9UL01 958 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 PCDHB5Q9Y5E4 795 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 CD48P09326 243 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 TPH1P17752 444 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 ASPAP45381 313 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 ZNF143P52747 638 aaPredicted RBP11.51□□□□□ -0.57
SFXN5-201ENST00000272433 ATXN1P54253 815 aaKnown RBP11.51□□□□□ -0.57
SFXN5-201ENST00000272433 CES3Q6UWW8 571 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 MON1BQ7L1V2 547 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 NAALADL1Q9UQQ1 740 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 SLC45A1Q9Y2W3 748 aa11.51□□□□□ -0.57
SFXN5-201ENST00000272433 UBA6A0AVT1 1052 aaPredicted RBP11.5□□□□□ -0.57
SFXN5-201ENST00000272433 TMEM120BA0PK00 339 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 GMNCA6NCL1 334 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 BANF1O75531 89 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 STAMBPO95630 424 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 TRUB2O95900 331 aaKnown RBP11.5□□□□□ -0.57
SFXN5-201ENST00000272433 SPATA31D3P0C874 917 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 TCF4P15884 667 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 HARS2P49590 506 aaKnown RBP11.5□□□□□ -0.57
SFXN5-201ENST00000272433 SPATA31D4Q6ZUB0 917 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 KATNAL2Q8IYT4 538 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 FAM136AQ96C01 138 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 SNX27Q96L92 541 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 POPDC2Q9HBU9 364 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 SIX4Q9UIU6 781 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 VANGL2Q9ULK5 521 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 MEIS3P2A8K0S8 358 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 TCP11X1B4DZS4 312 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 DDX3YO15523 660 aaKnown RBP11.5□□□□□ -0.57
SFXN5-201ENST00000272433 TSPAN3O60637 253 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 PIGRP01833 764 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 EDN1P05305 212 aa11.5□□□□□ -0.57
SFXN5-201ENST00000272433 URODP06132 367 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms