RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 TMEM199Q8N511 208 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 SCAMP5Q8TAC9 235 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 TBCBQ99426 244 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 VN1R3Q9BXE9 311 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 GPATCH2LQ9NWQ4 482 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 SYNJ2BP-COX16A0A087WUM0 186 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 C3orf70A6NLC5 250 aaPredicted RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 FSCN2O14926 492 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 HSF2BPO75031 334 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 PHF2O75151 1096 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 AMHP03971 560 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 HNRNPH1P31943 449 aaKnown RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 PCK1P35558 622 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 CCT5P48643 541 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 ALDH7A1P49419 539 aaKnown RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 GPR15P49685 360 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 DAOAP59103 153 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 GUCY2DQ02846 1103 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 KLF1Q13351 362 aaPredicted RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 DCAF6Q58WW2 860 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 EFHC1Q5JVL4 640 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 SPOUT1Q5T280 376 aaKnown RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 SYPL2Q5VXT5 272 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 ZNF280DQ6N043 979 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 C4orf50Q6ZRC1 276 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 FAM43BQ6ZT52 329 aaPredicted RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 MAGOHBQ96A72 148 aaKnown RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 RBM41Q96IZ5 413 aaKnown RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 TRIM51Q9BSJ1 452 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 RC3H2Q9HBD1 1191 aaKnown RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 CHST7Q9NS84 486 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 COX16Q9P0S2 106 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 DAB1O75553 588 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 KRT7P08729 469 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 TNFRSF8P28908 595 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 SCNN1AP37088 669 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 GRIK1P39086 918 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 CDKN2BP42772 138 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 KCNJ1P48048 391 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 LIG3P49916 1009 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 YWHAZP63104 245 aaKnown RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 SNX1Q13596 522 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 MRPL58Q14197 206 aaKnown RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 ACAP1Q15027 740 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 OTUD1Q5VV17 481 aaPredicted RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 BHLHA9Q7RTU4 235 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 SCN4BQ8IWT1 228 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 RCOR2Q8IZ40 523 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 C11orf84Q9BUA3 381 aaPredicted RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 DDX56Q9NY93 547 aaKnown RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 MTUS1Q9ULD2 1270 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 NAALADL1Q9UQQ1 740 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 PRPSAP2O60256 369 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 SOAT2O75908 522 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 ZBED1O96006 694 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 FYNP06241 537 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 CPB1P15086 417 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 MATKP42679 507 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 PTPN9P43378 593 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 SULT1E1P49888 294 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 CLUL1Q15846 466 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 GLE1Q53GS7 698 aaKnown RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 ZC3H12AQ5D1E8 599 aaKnown RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 EMC10Q5UCC4 262 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 C16orf59Q7L2K0 433 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 ATAD1Q8NBU5 361 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 ADAM32Q8TC27 787 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 RIN2Q8WYP3 895 aaPredicted RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 HAUS1Q96CS2 278 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 ZNF689Q96CS4 500 aaPredicted RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 TTPALQ9BTX7 342 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 DDX23Q9BUQ8 820 aaKnown RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 SLITRK6Q9H5Y7 841 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 EPB41L5Q9HCM4 733 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
CAPN9-201ENST00000271971 MRPL42Q9Y6G3 142 aaKnown RBP13.06□□□□□ -0.32
CAPN9-201ENST00000271971 hCG_1818297A0A087WSY0 165 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 C2CD2LO14523 706 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 RPL17P18621 184 aaKnown RBP13.05□□□□□ -0.32
CAPN9-201ENST00000271971 SLC5A3P53794 718 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 DYNLT1P63172 113 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 BTG3Q14201 252 aaPredicted RBP13.05□□□□□ -0.32
CAPN9-201ENST00000271971 CA9Q16790 459 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 DDR2Q16832 855 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 TFDP3Q5H9I0 405 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 CCDC137Q6PK04 289 aaKnown RBP13.05□□□□□ -0.32
CAPN9-201ENST00000271971 DCP1BQ8IZD4 617 aaKnown RBP13.05□□□□□ -0.32
CAPN9-201ENST00000271971 GPR152Q8TDT2 470 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 EDEM1Q92611 657 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 BADQ92934 168 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 IGSF21Q96ID5 467 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 SNRNP25Q9BV90 132 aaKnown RBP13.05□□□□□ -0.32
CAPN9-201ENST00000271971 CALN1Q9BXU9 219 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 MAGEB5Q9BZ81 275 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 DONSONQ9NYP3 566 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 CHD7Q9P2D1 2997 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 GREB1Q4ZG55 1949 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms