RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 DCP1BQ8IZD4 617 aaKnown RBP25.82■■□□□ 1.72
SSBP4-201ENST00000270061 TOP6BLQ8N6T0 577 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 C1orf131Q8NDD1 294 aaKnown RBP25.82■■□□□ 1.72
SSBP4-201ENST00000270061 ACTRT1Q8TDG2 376 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 ASAH2Q9NR71 780 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 FAM163BP0C2L3 166 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 SGO2Q562F6 1265 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 PRSS36Q5K4E3 855 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 DENND1BQ6P3S1 775 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 MTSS1LQ765P7 747 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 RASGEF1CQ8N431 466 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 TTC9BQ8N6N2 239 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 LEMD2Q8NC56 503 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 NOA1Q8NC60 698 aaKnown RBP25.82■■□□□ 1.72
SSBP4-201ENST00000270061 SPATA4Q8NEY3 305 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 ST13P5Q8NFI4 369 aaPredicted RBP25.82■■□□□ 1.72
SSBP4-201ENST00000270061 SPATA18Q8TC71 538 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 C2orf15Q8WU43 125 aaKnown RBP25.82■■□□□ 1.72
SSBP4-201ENST00000270061 FGF14Q92915 247 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 HEXIM2Q96MH2 286 aaKnown RBP25.82■■□□□ 1.72
SSBP4-201ENST00000270061 MRPL45Q9BRJ2 306 aaKnown RBP25.82■■□□□ 1.72
SSBP4-201ENST00000270061 PARVAQ9NVD7 372 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 DDX43Q9NXZ2 648 aaKnown RBP25.82■■□□□ 1.72
SSBP4-201ENST00000270061 GDE1Q9NZC3 331 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.82■■□□□ 1.72
SSBP4-201ENST00000270061 O00370 1275 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 COMTP21964 271 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 TUFMP49411 452 aaKnown RBP25.81■■□□□ 1.72
SSBP4-201ENST00000270061 DNA2P51530 1060 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 MAMLD1Q13495 774 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 SOWAHAQ2M3V2 549 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 PARM1Q6UWI2 310 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 DPH6Q7L8W6 267 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 LRRTM3Q86VH5 581 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 ADGRF2Q8IZF7 708 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 MMGT1Q8N4V1 131 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 FBXL6Q8N531 539 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 MSANTD4Q8NCY6 345 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 CD101Q93033 1021 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 MS4A14Q96JA4 679 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 ACBD6Q9BR61 282 aa25.81■■□□□ 1.72
SSBP4-201ENST00000270061 TTC7AQ9ULT0 858 aaPredicted RBP25.81■■□□□ 1.72
SSBP4-201ENST00000270061 NARSO43776 548 aaKnown RBP25.8■■□□□ 1.72
SSBP4-201ENST00000270061 CEBPBP17676 345 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 LHX1P48742 406 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 CDR1P51861 262 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 ERICH1Q86X53 443 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 HS6ST3Q8IZP7 471 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 SPPL2BQ8TCT7 592 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 TCEAL4Q96EI5 215 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 MCRS1Q96EZ8 462 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 SEPT5Q99719 369 aaPredicted RBP25.8■■□□□ 1.72
SSBP4-201ENST00000270061 CARD9Q9H257 536 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 ANAPC7Q9UJX3 599 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 KMT2EQ8IZD2 1858 aa25.8■■□□□ 1.72
SSBP4-201ENST00000270061 TCRBV5S1A1TA0A578 114 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 MICAL2O94851 1124 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 CCR2P41597 374 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 ORC1Q13415 861 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 MGAT5BQ3V5L5 792 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 LCLAT1Q6UWP7 414 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 STRIP2Q9ULQ0 834 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 ASB3Q9Y575 518 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 MYO1FO00160 1098 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 SOAT2O75908 522 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 PDGFBP01127 241 aaPredicted RBP25.79■■□□□ 1.72
SSBP4-201ENST00000270061 SRFP11831 508 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 MYL4P12829 197 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 H2AFXP16104 143 aaPredicted RBP25.79■■□□□ 1.72
SSBP4-201ENST00000270061 CTNNA2P26232 953 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 SLC1A1P43005 524 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 EPHA5P54756 1037 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 GSCP56915 257 aaPredicted RBP25.79■■□□□ 1.72
SSBP4-201ENST00000270061 C2CD6Q53TS8 623 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 UBL4BQ8N7F7 174 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 ANKZF1Q9H8Y5 726 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 ABI2Q9NYB9 513 aaPredicted RBP25.79■■□□□ 1.72
SSBP4-201ENST00000270061 LCMT1Q9UIC8 334 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 FBXL21Q9UKT6 434 aa25.79■■□□□ 1.72
SSBP4-201ENST00000270061 TUBBP07437 444 aa25.78■■□□□ 1.72
SSBP4-201ENST00000270061 NFE2Q16621 373 aaPredicted RBP25.78■■□□□ 1.72
SSBP4-201ENST00000270061 BTBD6Q96KE9 485 aa25.78■■□□□ 1.72
SSBP4-201ENST00000270061 RPP25Q9BUL9 199 aaKnown RBP25.78■■□□□ 1.72
SSBP4-201ENST00000270061 EHD2Q9NZN4 543 aa25.78■■□□□ 1.72
SSBP4-201ENST00000270061 PCDHB5Q9Y5E4 795 aa25.78■■□□□ 1.72
SSBP4-201ENST00000270061 CCDC66A2RUB6 948 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 TMEM110-MUSTN1A8MSY1 372 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 GABRDO14764 452 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 CEP104O60308 925 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 ACAT1P24752 427 aaKnown RBP25.77■■□□□ 1.72
SSBP4-201ENST00000270061 PCSK1P29120 753 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 ITIH5Q86UX2 942 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 OSTM1Q86WC4 334 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 CRYBG2Q8N1P7 616 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 KBTBD7Q8WVZ9 684 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 PSMG2Q969U7 264 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 DNAI2Q9GZS0 605 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 TMEM59LQ9UK28 342 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 CTNNA1P35221 906 aaKnown RBP25.77■■□□□ 1.72
SSBP4-201ENST00000270061 GPD2P43304 727 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms