RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 SYNDIG1Q9H7V2 258 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 RBM22Q9NW64 420 aaKnown RBP eCLIP14.18□□□□□ -0.14
NPC1-201ENST00000269228 TMEM120BA0PK00 339 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 SDR42E2A6NKP2 422 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 ZBTB22O15209 634 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 TGFB1I1O43294 461 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 HSD17B3P37058 310 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 TUBP50607 506 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 SGF29Q96ES7 293 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 ZNF558Q96NG5 402 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 FICDQ9BVA6 458 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 KCTD10Q9H3F6 313 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 IGFLR1Q9H665 355 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 ZMYM2Q9UBW7 1377 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 KRT4P19013 534 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 PLD1Q13393 1074 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 PPM1LQ5SGD2 360 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 LRRC6Q86X45 466 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 GRAMD1AQ96CP6 724 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 FTHL17Q9BXU8 183 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 ZNF212Q9UDV6 495 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 SOWAHBA6NEL2 793 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 MIPP30301 263 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 SPDYAQ5MJ70 313 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 FBXO25Q8TCJ0 367 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 SGSM3Q96HU1 749 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 MAML3Q96JK9 1138 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 POPDC2Q9HBU9 364 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 AVENQ9NQS1 362 aaPredicted RBP14.17□□□□□ -0.14
NPC1-201ENST00000269228 NR2E3Q9Y5X4 410 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 PLIN4Q96Q06 1357 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 LZTS3O60299 673 aaPredicted RBP14.17□□□□□ -0.14
NPC1-201ENST00000269228 CCDC22O60826 627 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 OR1E1P30953 314 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 MRNIPQ6NTE8 343 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 MFSD7Q6UXD7 560 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 C3orf20Q8ND61 904 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 GRID1Q9ULK0 1009 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 EPHB6O15197 1021 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 RAMP2O60895 175 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 PYGMP11217 842 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 LENG1Q96BZ8 264 aaPredicted RBP14.17□□□□□ -0.14
NPC1-201ENST00000269228 TRIM15Q9C019 465 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 SLC7A5P2Q9GIP4 190 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 NXF3Q9H4D5 531 aaKnown RBP14.17□□□□□ -0.14
NPC1-201ENST00000269228 L2HGDHQ9H9P8 463 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 F8VP50 259 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 ATP5HO75947 161 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 GCKP35557 465 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 HNRNPH2P55795 449 aaKnown RBP14.17□□□□□ -0.14
NPC1-201ENST00000269228 KCNMA1Q12791 1236 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 CNGA2Q16280 664 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 GRAMD1BQ3KR37 738 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 MARC1Q5VT66 337 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 SPATA21Q7Z572 469 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 COLGALT1Q8NBJ5 622 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 TAS2R14Q9NYV8 317 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 DMGDHQ9UI17 866 aaKnown RBP14.17□□□□□ -0.14
NPC1-201ENST00000269228 GGT7Q9UJ14 662 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 PLA2G4CQ9UP65 541 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 C2CD2Q9Y426 696 aa14.17□□□□□ -0.14
NPC1-201ENST00000269228 SMIM35A0A1B0GVV1 85 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 FRMD3A2A2Y4 597 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 KLRG2A4D1S0 409 aaPredicted RBP14.16□□□□□ -0.14
NPC1-201ENST00000269228 H0Y3Z8 333 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 ALDH18A1P54886 795 aaKnown RBP14.16□□□□□ -0.14
NPC1-201ENST00000269228 ZACNQ401N2 412 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 AGBL2Q5U5Z8 902 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 RPAINQ86UA6 219 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 FAM129AQ9BZQ8 928 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 PABPC3Q9H361 631 aaKnown RBP14.16□□□□□ -0.14
NPC1-201ENST00000269228 MRPL17Q9NRX2 175 aaKnown RBP14.16□□□□□ -0.14
NPC1-201ENST00000269228 FAM105AQ9NUU6 356 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 PCDHGB4Q9UN71 923 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 USH1CQ9Y6N9 552 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 MORC2Q9Y6X9 1032 aaPredicted RBP14.16□□□□□ -0.14
NPC1-201ENST00000269228 TTC36A6NLP5 189 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 PEX19P40855 299 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 MEA1Q16626 185 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 CNPY4Q8N129 248 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 KAT2BQ92831 832 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 ETNK1Q9HBU6 452 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 NPHS2Q9NP85 383 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 SF3B1O75533 1304 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■■■■■ 146.6
NPC1-201ENST00000269228 NCAM2O15394 837 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 TREHO43280 583 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 GRM5P41594 1212 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 ZBTB41Q5SVQ8 909 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 LVRNQ6Q4G3 990 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 LCA5Q86VQ0 697 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 UROC1Q96N76 676 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 LRRC40Q9H9A6 602 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 WHRNQ9P202 907 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 ANGPTL2Q9UKU9 493 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 HEATR9A2RTY3 570 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 TRIM66O15016 1216 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 XYLBO75191 536 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 ASGR1P07306 291 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 VCPP55072 806 aaKnown RBP14.16□□□□□ -0.14
NPC1-201ENST00000269228 BMT2Q1RMZ1 405 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms