RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 RC3H2Q9HBD1 1191 aaKnown RBP17.08■□□□□ 0.32
TPM1-201ENST00000267996 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.08■□□□□ 0.32
TPM1-201ENST00000267996 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.32
TPM1-201ENST00000267996 STAP1Q9ULZ2 295 aa17.08■□□□□ 0.32
TPM1-201ENST00000267996 NEU2Q9Y3R4 380 aa17.08■□□□□ 0.32
TPM1-201ENST00000267996 NT5C1B-RDH14C9J2C7 533 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 LIASO43766 372 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 ECEL1O95672 775 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 LTFP02788 710 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 CSF2RAP15509 400 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 CYP2F1P24903 491 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 PBX3P40426 434 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 MAGEA11P43364 429 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 CDH6P55285 790 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 DPYSL3Q14195 570 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 CASP8Q14790 479 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 ERMARDQ5T6L9 678 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 SYPL2Q5VXT5 272 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 UBE2Q1Q7Z7E8 422 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 DDX42Q86XP3 938 aaKnown RBP eCLIP17.07■□□□□ 0.32
TPM1-201ENST00000267996 RNF168Q8IYW5 571 aaPredicted RBP17.07■□□□□ 0.32
TPM1-201ENST00000267996 GRK7Q8WTQ7 553 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 NKD2Q969F2 451 aaPredicted RBP17.07■□□□□ 0.32
TPM1-201ENST00000267996 PCDH18Q9HCL0 1135 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 RRN3Q9NYV6 651 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 CST8O60676 142 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 AMHP03971 560 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 RAG1P15918 1043 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 IL4RP24394 825 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 SULT1E1P49888 294 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 ATXN1P54253 815 aaKnown RBP17.07■□□□□ 0.32
TPM1-201ENST00000267996 PITX1P78337 314 aaPredicted RBP17.07■□□□□ 0.32
TPM1-201ENST00000267996 DPYSL2Q16555 572 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 ZC3H12AQ5D1E8 599 aaKnown RBP17.07■□□□□ 0.32
TPM1-201ENST00000267996 CEP57Q86XR8 500 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 PSTKQ8IV42 348 aaKnown RBP17.07■□□□□ 0.32
TPM1-201ENST00000267996 MAP7D3Q8IWC1 876 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 TTC13Q8NBP0 860 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 SLC35B2Q8TB61 432 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 FAF2Q96CS3 445 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 PGAP3Q96FM1 320 aaPredicted RBP17.07■□□□□ 0.32
TPM1-201ENST00000267996 B3GALT6Q96L58 329 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 C8orf48Q96LL4 319 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 PRDM5Q9NQX1 630 aaPredicted RBP17.07■□□□□ 0.32
TPM1-201ENST00000267996 NAALADL1Q9UQQ1 740 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 DRG1Q9Y295 367 aaKnown RBP17.07■□□□□ 0.32
TPM1-201ENST00000267996 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
TPM1-201ENST00000267996 H7C4K7 107 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 ALDH7A1P49419 539 aaKnown RBP17.06■□□□□ 0.32
TPM1-201ENST00000267996 SMARCB1Q12824 385 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 MMRN1Q13201 1228 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 PTK6Q13882 451 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 OASLQ15646 514 aaKnown RBP17.06■□□□□ 0.32
TPM1-201ENST00000267996 CA9Q16790 459 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 RTP2Q5QGT7 225 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 ANKS3Q6ZW76 656 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 TAS1R1Q7RTX1 841 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 TMEM199Q8N511 208 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 RNF157Q96PX1 679 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 SLC9A7Q96T83 725 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 TTPALQ9BTX7 342 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 CALN1Q9BXU9 219 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 DPH5Q9H2P9 285 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 VIPAS39Q9H9C1 493 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 GPATCH2LQ9NWQ4 482 aa17.06■□□□□ 0.32
TPM1-201ENST00000267996 ABI2Q9NYB9 513 aaPredicted RBP17.06■□□□□ 0.32
TPM1-201ENST00000267996 FAM153BP0C7A2 387 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 L1CAMP32004 1257 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 GBP1P32455 592 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 RDXP35241 583 aaKnown RBP17.05■□□□□ 0.32
TPM1-201ENST00000267996 GRIK1P39086 918 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 RPL21P46778 160 aaKnown RBP17.05■□□□□ 0.32
TPM1-201ENST00000267996 SLC5A3P53794 718 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 VCPP55072 806 aaKnown RBP17.05■□□□□ 0.32
TPM1-201ENST00000267996 WDR5P61964 334 aaKnown RBP17.05■□□□□ 0.32
TPM1-201ENST00000267996 DEFB103AP81534 67 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 LMNB2Q03252 620 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 KRT17Q04695 432 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 GPR17Q13304 367 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 BYSLQ13895 437 aaKnown RBP17.05■□□□□ 0.32
TPM1-201ENST00000267996 TFDP2Q14188 446 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 KRT81Q14533 505 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 KCTD19Q17RG1 926 aaPredicted RBP17.05■□□□□ 0.32
TPM1-201ENST00000267996 FAM153CQ494X1 144 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 RSPO2Q6UXX9 243 aaPredicted RBP17.05■□□□□ 0.32
TPM1-201ENST00000267996 SND1Q7KZF4 910 aaKnown RBP eCLIP17.05■□□□□ 0.32
TPM1-201ENST00000267996 IGSF21Q96ID5 467 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 FAM118BQ9BPY3 351 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 ZNF670Q9BS34 389 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 TRIM62Q9BVG3 475 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 NEUROG2Q9H2A3 272 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 ZDHHC18Q9NUE0 388 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 MTMR10Q9NXD2 777 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 GRHL1Q9NZI5 618 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 FAM153AQ9UHL3 310 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 DNPEPQ9ULA0 475 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 FZD10Q9ULW2 581 aa17.05■□□□□ 0.32
TPM1-201ENST00000267996 APOC4-APOC2K7ER74 178 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 M0QYT0 321 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 TRIM66O15016 1216 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 345.3 ms