RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 IGF2BP3O00425 579 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDH3-201ENST00000264012 RECQL4O94761 1208 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 SNHG28P0DPA3 235 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 SERPINB8P50452 374 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 ECM1Q16610 540 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 DENND1BQ6P3S1 775 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 TMC3Q7Z5M5 1100 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 XPNPEP3Q9NQH7 507 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 DNALI1O14645 258 aaPredicted RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 RIPK2O43353 540 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 ASS1P00966 412 aaKnown RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 FAM153BP0C7A2 387 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 PTPN7P35236 360 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 ELAVL2Q12926 359 aaKnown RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 FAM153CQ494X1 144 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 CAPRIN2Q6IMN6 1127 aaKnown RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 BAP1Q92560 729 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 SPATA17Q96L03 361 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 TINF2Q9BSI4 451 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 IARS2Q9NSE4 1012 aaKnown RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 FAM153AQ9UHL3 310 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 SNX5Q9Y5X3 404 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 ADGRA2Q96PE1 1338 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 ALDH2P05091 517 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 MIPP30301 263 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 AVPR1AP37288 418 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 NUMBP49757 651 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 ARHGAP15Q53QZ3 475 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 UNC45BQ8IWX7 931 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 RFWD2Q8NHY2 731 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 DNAJC18Q9H819 358 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 KIF17Q9P2E2 1029 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 E5RJQ4 531 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 PPP1R11O60927 126 aaPredicted RBP14.44□□□□□ -0.1
CDH3-201ENST00000264012 CCR1P32246 355 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 OXCT1P55809 520 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 PTK2BQ14289 1009 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 MTFR1Q15390 333 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 SETD3Q86TU7 594 aaPredicted RBP14.44□□□□□ -0.1
CDH3-201ENST00000264012 CATSPER1Q8NEC5 780 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 UBE2OQ9C0C9 1292 aaKnown RBP14.44□□□□□ -0.1
CDH3-201ENST00000264012 UBP1Q9NZI7 540 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 KANSL3Q9P2N6 904 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 NAALADL1Q9UQQ1 740 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 F8VP50 259 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 BEX3Q00994 111 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 NLRP9Q7RTR0 991 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 STRA8Q7Z7C7 330 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 TRPM4Q8TD43 1214 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 USP13Q92995 863 aaPredicted RBP14.44□□□□□ -0.1
CDH3-201ENST00000264012 FICDQ9BVA6 458 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 CHST12Q9NRB3 414 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 RRN3Q9NYV6 651 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 SPATA31C2B4DYI2 1134 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 PLA2G6O60733 806 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 MAFO75444 373 aaPredicted RBP14.44□□□□□ -0.1
CDH3-201ENST00000264012 URODP06132 367 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 SLC6A3Q01959 620 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 POLD3Q15054 466 aaPredicted RBP14.44□□□□□ -0.1
CDH3-201ENST00000264012 LRRC36Q1X8D7 754 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 POTEAQ6S8J7 498 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 DEFB106AQ8N104 65 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 CELF6Q96J87 481 aaKnown RBP14.44□□□□□ -0.1
CDH3-201ENST00000264012 CCDC90BQ9GZT6 254 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 YY1AP1Q9H869 796 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 HEY2Q9UBP5 337 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 TRMT6Q9UJA5 497 aaKnown RBP14.44□□□□□ -0.1
CDH3-201ENST00000264012 DNPEPQ9ULA0 475 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 TNFSF13BQ9Y275 285 aa14.44□□□□□ -0.1
CDH3-201ENST00000264012 MYPNQ86TC9 1320 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 SOAT2O75908 522 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 DGKIO75912 1065 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 PECAM1P16284 738 aaPredicted RBP14.43□□□□□ -0.1
CDH3-201ENST00000264012 CAPSQ13938 189 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 HYIQ5T013 277 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 FAM71AQ8IYT1 594 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 HS6ST3Q8IZP7 471 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.43□□□□□ -0.1
CDH3-201ENST00000264012 SRP72O76094 671 aaKnown RBP14.43□□□□□ -0.1
CDH3-201ENST00000264012 SUPT7LO94864 414 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 ELK3P41970 407 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 ITGB3BPQ13352 177 aaPredicted RBP14.43□□□□□ -0.1
CDH3-201ENST00000264012 BMT2Q1RMZ1 405 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 KIAA0319LQ8IZA0 1049 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 SMARCD1Q96GM5 515 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 CEP41Q9BYV8 373 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 SHCBP1LQ9BZQ2 653 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 FHDC1Q9C0D6 1143 aaPredicted RBP14.43□□□□□ -0.1
CDH3-201ENST00000264012 RIC8BQ9NVN3 520 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 PKD2L2Q9NZM6 624 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 MED1Q15648 1581 aaPredicted RBP14.43□□□□□ -0.1
CDH3-201ENST00000264012 CALCAP01258 141 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 AMPD1P23109 780 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 HNRNPH1P31943 449 aaKnown RBP14.43□□□□□ -0.1
CDH3-201ENST00000264012 POU4F1Q01851 419 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 MPP3Q13368 585 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 BMPR2Q13873 1038 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 EFL1Q7Z2Z2 1120 aaKnown RBP14.43□□□□□ -0.1
CDH3-201ENST00000264012 SNX31Q8N9S9 440 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 NT5MQ9NPB1 228 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms