RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 PCDHB8Q9UN66 801 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 NLRC5Q86WI3 1866 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 PTPRDP23468 1912 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 FBXO21O94952 628 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 COL6A1P12109 1028 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 DAOAP59103 153 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 TERF2Q15554 542 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 P3H1Q32P28 736 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 ANKRD20A8PQ5CZ79 823 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 CEP85LQ5SZL2 805 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 IZUMO3Q5VZ72 239 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 CTU1Q7Z7A3 348 aaKnown RBP16.48■□□□□ 0.23
VPS26A-201ENST00000263559 CCDC185Q8N715 623 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 NT5C3BQ969T7 300 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 FAM193BQ96PV7 902 aaPredicted RBP16.48■□□□□ 0.23
VPS26A-201ENST00000263559 SEMA4AQ9H3S1 761 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 ELAC1Q9H777 363 aaKnown RBP16.48■□□□□ 0.23
VPS26A-201ENST00000263559 FAM204AQ9H8W3 233 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 POPDC2Q9HBU9 364 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 AAASQ9NRG9 546 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 PRG3Q9Y2Y8 225 aaPredicted RBP16.48■□□□□ 0.23
VPS26A-201ENST00000263559 PCDHB7Q9Y5E2 793 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 ARHGEF37A1IGU5 675 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 YJEFN3A6XGL0 299 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 E7ENQ6 273 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 SGK1O00141 431 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 FYNP06241 537 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 USP17L7P0C7H9 530 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 L1CAMP32004 1257 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 CHKAP35790 457 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 YWHAHQ04917 246 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-201ENST00000263559 TFDP2Q14188 446 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 PPP6R3Q5H9R7 873 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-201ENST00000263559 OTUD1Q5VV17 481 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-201ENST00000263559 CCDC25Q86WR0 208 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 SEPT8Q92599 483 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 SLC2A13Q96QE2 648 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 NPY6RQ99463 290 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 PABPC3Q9H361 631 aaKnown RBP16.47■□□□□ 0.23
VPS26A-201ENST00000263559 DHX35Q9H5Z1 703 aaKnown RBP16.47■□□□□ 0.23
VPS26A-201ENST00000263559 CNGB3Q9NQW8 809 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 AP4E1Q9UPM8 1137 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 NAALADL1Q9UQQ1 740 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 TMEM189-UBE2V1I3L0A0 370 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 IFNB1P01574 187 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 RARGP13631 454 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 GDF10P55107 478 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 CAV1Q03135 178 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 SLMAPQ14BN4 828 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 UBAP2Q5T6F2 1119 aaKnown RBP16.47■□□□□ 0.23
VPS26A-201ENST00000263559 FAM131BQ86XD5 332 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 PQLC3Q8N755 202 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 PCDH19Q8TAB3 1148 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 CCHCR1Q8TD31 782 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-201ENST00000263559 SCLYQ96I15 445 aa16.47■□□□□ 0.23
VPS26A-201ENST00000263559 GATMP50440 423 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 EIF3EP60228 445 aaKnown RBP16.46■□□□□ 0.23
VPS26A-201ENST00000263559 TSPY1Q01534 308 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 ZNF844Q08AG5 666 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 DPYSL2Q16555 572 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 C1orf228Q6PIY5 440 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 BBOF1Q8ND07 529 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 ADAM7Q9H2U9 754 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 MTMR10Q9NXD2 777 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 SYNJ2BP-COX16A0A087WUM0 186 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 GOLGA6CA6NDK9 693 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 ZBED1O96006 694 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 GOLGA6DP0CG33 693 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 RBP3P10745 1247 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 GPS1Q13098 491 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 HIBCHQ6NVY1 386 aaPredicted RBP16.46■□□□□ 0.23
VPS26A-201ENST00000263559 BNIPLQ7Z465 357 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 VSIG1Q86XK7 387 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 ABI1Q8IZP0 508 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 PLD5Q8N7P1 536 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 P3H4Q92791 437 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 PWWP2AQ96N64 755 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 CASD1Q96PB1 797 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 ZNF670Q9BS34 389 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 GOLGA6AQ9NYA3 693 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 COX16Q9P0S2 106 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 STAP1Q9ULZ2 295 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 TTC3P53804 2025 aa16.46■□□□□ 0.23
VPS26A-201ENST00000263559 M0QYT0 321 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 NOMO1Q15155 1222 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 MAPRE1Q15691 268 aaKnown RBP16.45■□□□□ 0.22
VPS26A-201ENST00000263559 KCTD16Q68DU8 428 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 B4GALNT4Q76KP1 1039 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 UNC45BQ8IWX7 931 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 FAF2Q96CS3 445 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 KCTD15Q96SI1 283 aaPredicted RBP16.45■□□□□ 0.22
VPS26A-201ENST00000263559 NRDE2Q9H7Z3 1164 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 PCDH9Q9HC56 1237 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 DMAP1Q9NPF5 467 aaPredicted RBP16.45■□□□□ 0.22
VPS26A-201ENST00000263559 PRDM10Q9NQV6 1147 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 DNALI1O14645 258 aaPredicted RBP16.45■□□□□ 0.22
VPS26A-201ENST00000263559 APOL1O14791 398 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 CAPN9O14815 690 aa16.45■□□□□ 0.22
VPS26A-201ENST00000263559 MCF2LO15068 1137 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms