RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GSTM1P09488 218 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 MLNP12872 115 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 PLK1P53350 603 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 PIPSLA2A3N6 862 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 HEATR9A2RTY3 570 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 TMEM150BA6NC51 233 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 KBTBD13C9JR72 458 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 VWA5AO00534 786 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 ZNF189O75820 626 aaPredicted RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 SOAT2O75908 522 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 TOMM70O94826 608 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 POU6F1Q14863 301 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 STK32AQ8WU08 396 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 CDRT15Q96T59 188 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 SYNDIG1Q9H7V2 258 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 RAB21Q9UL25 225 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 EIF3LQ9Y262 564 aaKnown RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 FAM25AB3EWG3 89 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 FAM25CB3EWG5 89 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 FAM25GB3EWG6 89 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 FAM86B1E9PN63 330 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 SH3BGRLO75368 114 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 DDHD2O94830 711 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 PECAM1P16284 738 aaPredicted RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 NELFEP18615 380 aaKnown RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 FAAP100Q0VG06 881 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 ITGADQ13349 1161 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 CREG2Q8IUH2 290 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 COLGALT1Q8NBJ5 622 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 SH3TC2Q8TF17 1288 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 GPRASP2Q96D09 838 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 KIAA1683Q9H0B3 1180 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 GDF3Q9NR23 364 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 CRLS1Q9UJA2 301 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 ACO1P21399 889 aaKnown RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 CSTF3Q12996 717 aaKnown RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 TYW3Q6IPR3 259 aaKnown RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 NT5DC3Q86UY8 548 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 TNIP2Q8NFZ5 429 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 TRAPPC9Q96Q05 1148 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 TIPINQ9BVW5 301 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 HDHD2Q9H0R4 259 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 VTA1Q9NP79 307 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 SYBUQ9NX95 663 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 CCDC167Q9P0B6 97 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 ADGRA3Q8IWK6 1321 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 KRT87PA6NCN2 255 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 TRAPPC3O43617 180 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 TCF7P36402 384 aaPredicted RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 PEX5P50542 639 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 ARHGEF7Q14155 803 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 BRINP3Q76B58 766 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 MIB1Q86YT6 1006 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 SEPT1Q8WYJ6 367 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 ACOX2Q99424 681 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 RAD18Q9NS91 495 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 LRRIQ1Q96JM4 1722 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 HNRNPRO43390 633 aaKnown RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 STIP1P31948 543 aaKnown RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 FDFT1P37268 417 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 NCKAP1LP55160 1127 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 ARMCX4Q5H9R4 360 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 ADGRA1Q86SQ6 560 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 KYQ8NBH2 561 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 RMND5BQ96G75 393 aaPredicted RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 TPD52L3Q96J77 140 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 GPAMQ9HCL2 828 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 TCF7L2Q9NQB0 619 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 CHST7Q9NS84 486 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 BTBD7Q9P203 1132 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 PRR23AA6NEV1 266 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 ENTPD5O75356 428 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 OR1G1P47890 313 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 RGS4P49798 205 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 C21orf59P57076 290 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 SLC25A3Q00325 362 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 DGCR6Q14129 220 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 WASHC2DQ5SRD0 308 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 SNX32Q86XE0 403 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 C10orf53Q8N6V4 93 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 PCDH20Q8N6Y1 951 aaKnown RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 ACTL9Q8TC94 416 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 PPP1R10Q96QC0 940 aaKnown RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 CINPQ9BW66 212 aaPredicted RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 KRT84Q9NSB2 600 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 KBTBD4Q9NVX7 518 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 FAM237BA0A1B0GVD1 139 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 UBDO15205 165 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 HS6ST1O60243 411 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 TCF3P15923 654 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 FEN1P39748 380 aaKnown RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 LSM3P62310 102 aaKnown RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 POLD3Q15054 466 aaPredicted RBP12.41□□□□□ -0.42
SMG6-201ENST00000263073 CACHD1Q5VU97 1274 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 ZNF614Q8N883 585 aa12.41□□□□□ -0.42
SMG6-201ENST00000263073 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMG6-201ENST00000263073 BHLHE22Q8NFJ8 381 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms