RNA–Protein interactions for RNA: ENST00000262963.10

PTPRS-201, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 5 BASIC

Gene PTPRS, Length 4,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-201ENST00000262963 VTA1Q9NP79 307 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 TRMT6Q9UJA5 497 aaKnown RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 HSPA1AP0DMV8 641 aaKnown RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 HSPA1BP0DMV9 641 aaKnown RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 CNTFP26441 200 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 POLD3Q15054 466 aaPredicted RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 CAPRIN2Q6IMN6 1127 aaKnown RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 SLC26A11Q86WA9 606 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 SUGP1Q8IWZ8 645 aaKnown RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 TSEN2Q8NCE0 465 aaKnown RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 AENQ8WTP8 325 aaKnown RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 SGF29Q96ES7 293 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 FAR2Q96K12 515 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 TMEM121Q9BTD3 319 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 C16orf96A6NNT2 1141 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 SERPINB8P50452 374 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 ALDH5A1P51649 535 aaPredicted RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 AMPD2Q01433 879 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 SKIV2LQ15477 1246 aaKnown RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 KBTBD12Q3ZCT8 623 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 ZC3H12BQ5HYM0 836 aaKnown RBP12.51□□□□□ -0.41
PTPRS-201ENST00000262963 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 UNC45BQ8IWX7 931 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 ABHD16BQ9H3Z7 469 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 RRN3Q9NYV6 651 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 SHOC2Q9UQ13 582 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 SLC4A7Q9Y6M7 1214 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 KCPQ6ZWJ8 1503 aa12.51□□□□□ -0.41
PTPRS-201ENST00000262963 DCDC2CA8MYV0 355 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 PTPRAP18433 802 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 KLC1Q07866 573 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 FLOT2Q14254 428 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 CYTH1Q15438 398 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 CTXN3Q4LDR2 81 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 HYIQ5T013 277 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 NT5DC4Q86YG4 428 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 SNX31Q8N9S9 440 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 EPS8L1Q8TE68 723 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 BLOC1S6Q9UL45 172 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 PHTF1Q9UMS5 762 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 DRG1Q9Y295 367 aaKnown RBP12.5□□□□□ -0.41
PTPRS-201ENST00000262963 EVPLLA8MZ36 301 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 C2CD2LO14523 706 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 SERPIND1P05546 499 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 MYBL2P10244 700 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 GRAMD4Q6IC98 578 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 ZNF280DQ6N043 979 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 RFWD2Q8NHY2 731 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 TRAPPC12Q8WVT3 735 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 P2RX7Q99572 595 aaKnown RBP12.5□□□□□ -0.41
PTPRS-201ENST00000262963 PRPF18Q99633 342 aaKnown RBP12.5□□□□□ -0.41
PTPRS-201ENST00000262963 APOL5Q9BWW9 433 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 AVENQ9NQS1 362 aaPredicted RBP12.5□□□□□ -0.41
PTPRS-201ENST00000262963 CES2O00748 559 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 SUPT7LO94864 414 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 ASS1P00966 412 aaKnown RBP12.5□□□□□ -0.41
PTPRS-201ENST00000262963 JCHAINP01591 159 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 RAP1GAPP47736 663 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 COPAP53621 1224 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 GRIK4Q16099 956 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 TAF2Q6P1X5 1199 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 IRF2BP2Q7Z5L9 587 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 ZNF555Q8NEP9 628 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 RBBP8Q99708 897 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 BATF3Q9NR55 127 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 SETD4Q9NVD3 440 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 HNRNPRO43390 633 aaKnown RBP12.5□□□□□ -0.41
PTPRS-201ENST00000262963 H2AFYO75367 372 aaKnown RBP12.5□□□□□ -0.41
PTPRS-201ENST00000262963 VPS26AO75436 327 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 DYNC1I2Q13409 638 aaKnown RBP12.5□□□□□ -0.41
PTPRS-201ENST00000262963 ZDHHC17Q8IUH5 632 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 HS6ST3Q8IZP7 471 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 CLEC4FQ8N1N0 589 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 KIF2BQ8N4N8 673 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 SEPT8Q92599 483 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 PAFAH2Q99487 392 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 VAV3Q9UKW4 847 aa12.5□□□□□ -0.41
PTPRS-201ENST00000262963 FAM95CA0A1B0GW59 222 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 CALCAP01258 141 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 HOXC6P09630 235 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 RARAP10276 462 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 SLC27A1Q6PCB7 646 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 C16orf87Q6PH81 154 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 MAGEB18Q96M61 343 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 SYT15Q9BQS2 421 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 CPA4Q9UI42 421 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 UBIAD1Q9Y5Z9 338 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 IGF2BP3O00425 579 aaKnown RBP eCLIP12.49□□□□□ -0.417e-6■□□□□ 9.9
PTPRS-201ENST00000262963 CKMP06732 381 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 RAB27AP51159 221 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 TKTL1P51854 596 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 PAN2Q504Q3 1202 aaKnown RBP12.49□□□□□ -0.41
PTPRS-201ENST00000262963 NLRP9Q7RTR0 991 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 APBB2Q92870 758 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 SPATA16Q9BXB7 569 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 TSPAN16Q9UKR8 245 aa12.49□□□□□ -0.41
PTPRS-201ENST00000262963 CHD2O14647 1828 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms