RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 PDIK1LQ8N165 341 aa13.46□□□□□ -0.25
SPTLC1-201ENST00000262554 ATP11CQ8NB49 1132 aa13.46□□□□□ -0.25
SPTLC1-201ENST00000262554 PCDH19Q8TAB3 1148 aa13.46□□□□□ -0.25
SPTLC1-201ENST00000262554 TRIB2Q92519 343 aa13.46□□□□□ -0.25
SPTLC1-201ENST00000262554 SENP6Q9GZR1 1112 aaPredicted RBP13.46□□□□□ -0.25
SPTLC1-201ENST00000262554 EURLQ9NYK6 297 aa13.46□□□□□ -0.25
SPTLC1-201ENST00000262554 PAK5Q9P286 719 aa13.46□□□□□ -0.25
SPTLC1-201ENST00000262554 DDX20Q9UHI6 824 aaKnown RBP13.46□□□□□ -0.25
SPTLC1-201ENST00000262554 HEY1Q9Y5J3 304 aa13.46□□□□□ -0.25
SPTLC1-201ENST00000262554 E7ESA3 106 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 POC1B-GALNT4F8VUJ3 575 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 GPR182O15218 404 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 ATP2C2O75185 946 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 ZBED1O96006 694 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 CHRNA1P02708 482 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 CTSHP09668 335 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 NPR3P17342 541 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 CYP2F1P24903 491 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 L1CAMP32004 1257 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 MLH1P40692 756 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 MATKP42679 507 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 TM4SF4P48230 202 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 IFNAR2P48551 515 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 ADIGQ0VDE8 80 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 FNBP1LQ5T0N5 605 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 PPP1R21Q6ZMI0 780 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 CAPN12Q6ZSI9 719 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 PIGZQ86VD9 579 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 FUKQ8N0W3 1084 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 TAB3Q8N5C8 712 aaPredicted RBP13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 SEC16BQ96JE7 1060 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 GAD1Q99259 594 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 MED10Q9BTT4 135 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 DHX35Q9H5Z1 703 aaKnown RBP13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 NRDE2Q9H7Z3 1164 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 AP4E1Q9UPM8 1137 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 TLL2Q9Y6L7 1015 aa13.46□□□□□ -0.26
SPTLC1-201ENST00000262554 BCLAF3A2AJT9 711 aaKnown RBP13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 MEIS3P2A8K0S8 358 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 RASA4BC9J798 803 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 ANKRD65E5RJM6 399 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 GABRDO14764 452 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 KCNN4O15554 427 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 SEPT4O43236 478 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 RASA4O43374 803 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 BANF1O75531 89 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 TMEM63AO94886 807 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 CREB1P16220 341 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 ATP2A2P16615 1042 aaKnown RBP13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 ACAT1P24752 427 aaKnown RBP13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 GAD2Q05329 585 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 SLC25A52Q3SY17 297 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 YTHDF3Q7Z739 585 aaKnown RBP13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 RPAINQ86UA6 219 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 CDKL3Q8IVW4 592 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 TMEM86AQ8N2M4 240 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 MGARPQ8TDB4 240 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 KCTD13Q8WZ19 329 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 MAML1Q92585 1016 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 FAM149B1Q96BN6 582 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 RTP4Q96DX8 246 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 CABS1Q96KC9 395 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 SENP8Q96LD8 212 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 ARHGAP39Q9C0H5 1083 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 NSRP1Q9H0G5 558 aaKnown RBP13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 USP29Q9HBJ7 922 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 UBN1Q9NPG3 1134 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 DDX43Q9NXZ2 648 aaKnown RBP13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 NKIRAS1Q9NYS0 192 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 SLC24A2Q9UI40 661 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 GABRQQ9UN88 632 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 GIT1Q9Y2X7 761 aa13.45□□□□□ -0.26
SPTLC1-201ENST00000262554 TCRBV7S3A2A0A539 114 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 FOXO6A8MYZ6 492 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 CLDN5O00501 218 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 CHADO15335 359 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 DAB1O75553 588 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 TOMM70O94826 608 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 VIMP08670 466 aaKnown RBP13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 TSHRP16473 764 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 GCAP28676 217 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 LHX1P48742 406 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 FLT3LGP49771 235 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 SULT1E1P49888 294 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 GPX6P59796 221 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 NKX3-2P78367 333 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 RASA2Q15283 850 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 BBS9Q3SYG4 887 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 MSS51Q4VC12 460 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 MDH1BQ5I0G3 518 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 C4orf22Q6V702 233 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 ARHGEF18Q6ZSZ5 1173 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 TAX1BP1Q86VP1 789 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 PALM2Q8IXS6 379 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 DEFB106AQ8N104 65 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 SIX6OS1Q8N1H7 587 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 OTUD6BQ8N6M0 293 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 ANKRD42Q8N9B4 389 aa13.44□□□□□ -0.26
SPTLC1-201ENST00000262554 FBXO36Q8NEA4 188 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms