RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 DMAC2Q9NW81 257 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 RBAKQ9NYW8 714 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 SH3GLB1Q9Y371 365 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 HBS1LQ9Y450 684 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 CYP3A7-CYP3A51PA0A087WV96 503 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 TPD52L2O43399 206 aaKnown RBP16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 TNFAIP8O95379 198 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 AMHP03971 560 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 RARRES1P49788 294 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 OR6B2Q6IFH4 312 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 PLEKHA7Q6IQ23 1121 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 FASTKD5Q7L8L6 764 aaKnown RBP16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 TMC7Q7Z402 723 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 GPD1LQ8N335 351 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 DEPTORQ8TB45 409 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 SGF29Q96ES7 293 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 MSTO1Q9BUK6 570 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 SNED1Q8TER0 1413 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 PABPC4LP0CB38 370 aaKnown RBP16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 TFE3P19532 575 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 MTMR1Q13613 665 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 CARTPTQ16568 116 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 THNSL1Q8IYQ7 743 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 PCDH20Q8N6Y1 951 aaKnown RBP16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 CCNYQ8ND76 341 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 OLIG1Q8TAK6 271 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 DCAKDQ8WVC6 231 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 CCDC17Q96LX7 622 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 KIF1AQ12756 1690 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 F8W8V4 182 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 KLHL2O95198 593 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 CRABP2P29373 138 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 HADHBP55084 474 aaKnown RBP16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 KRT72Q14CN4 511 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 LDLRAP1Q5SW96 308 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 PDZD8Q8NEN9 1154 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 ZNF606Q8WXB4 792 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 IFT43Q96FT9 208 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 TSNARE1Q96NA8 513 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 SERPINI1Q99574 410 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 C17orf75Q9HAS0 396 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 ZNF358Q9NW07 568 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 PTTG2Q9NZH5 202 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 TJP2Q9UDY2 1190 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 CAMTA1Q9Y6Y1 1673 aa16.47■□□□□ 0.23
PRPF40B-201ENST00000261897 SAC3D1A6NKF1 404 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 SIN3BO75182 1162 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 PPM1JQ5JR12 505 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 FAM102AQ5T9C2 384 aaPredicted RBP16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 PQLC1Q8N2U9 271 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 PIWIL2Q8TC59 973 aaKnown RBP16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 AKAP10O43572 662 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 ZC3H11AO75152 810 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 CRTAMO95727 393 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 TPD52P55327 224 aaPredicted RBP16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 BCAR1P56945 870 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 KLHL35Q6PF15 583 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 FRMD7Q6ZUT3 714 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 IFNEQ86WN2 208 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 TSPAN14Q8NG11 270 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 CYGBQ8WWM9 190 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 MPHOSPH6Q99547 160 aaKnown RBP16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 TLE6Q9H808 572 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 TBC1D23Q9NUY8 699 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 NDUFA13Q9P0J0 144 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 GABBR1Q9UBS5 961 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 WARS2Q9UGM6 360 aaKnown RBP16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 POLLQ9UGP5 575 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 MYO18AQ92614 2054 aaKnown RBP16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 NR4A1P22736 598 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 RGS7P49802 495 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 SLC5A3P53794 718 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 DPYSL3Q14195 570 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 NEDD8Q15843 81 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 TRAPPC3LQ5T215 181 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 NANOGNBQ7Z5D8 188 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 MKL1Q969V6 931 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 SSX2IPQ9Y2D8 614 aa16.46■□□□□ 0.23
PRPF40B-201ENST00000261897 hCG_1818297A0A087WSY0 165 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 A0A088AWK7 358 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 GOLGA8TH3BQL2 631 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 PPM1LQ5SGD2 360 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 ABRAQ8N0Z2 381 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 SREK1Q8WXA9 508 aaKnown RBP16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 TARS2Q9BW92 718 aaKnown RBP16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 KLC2Q9H0B6 622 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 TRNAU1APQ9NX07 287 aaKnown RBP16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 TJP1Q07157 1748 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 J3QRK9 145 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 PSMD10O75832 226 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 OCM2P0CE71 109 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 OCMP0CE72 109 aaPredicted RBP16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 CDK4P11802 303 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 ATP2B4P23634 1241 aa16.45■□□□□ 0.22
PRPF40B-201ENST00000261897 EPHA3P29320 983 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms