RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 LINGO3P0C6S8 592 aa15.05■□□□□ -0
SFSWAP-201ENST00000261674 TAP1Q03518 808 aa15.05■□□□□ -0
SFSWAP-201ENST00000261674 NUDCD3Q8IVD9 361 aa15.05■□□□□ -0
SFSWAP-201ENST00000261674 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
SFSWAP-201ENST00000261674 ALKBH8Q96BT7 664 aaKnown RBP15.05■□□□□ -0
SFSWAP-201ENST00000261674 OXNAD1Q96HP4 312 aaPredicted RBP15.05■□□□□ -0
SFSWAP-201ENST00000261674 CORO1CQ9ULV4 474 aaPredicted RBP15.05■□□□□ -0
SFSWAP-201ENST00000261674 CNTN6Q9UQ52 1028 aa15.05■□□□□ -0
SFSWAP-201ENST00000261674 TCRBV5S1A1TA0A578 114 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 NOP56O00567 594 aaKnown RBP15.04■□□□□ -0
SFSWAP-201ENST00000261674 PRPSAP2O60256 369 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 ITGB3P05106 788 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 RBL1P28749 1068 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 LAMTOR4Q0VGL1 99 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 BST1Q10588 318 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 CCL14Q16627 93 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 PPP1R15BQ5SWA1 713 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.04■□□□□ -0
SFSWAP-201ENST00000261674 ZNF276Q8N554 614 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 HIPK4Q8NE63 616 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 PIWIL1Q96J94 861 aaKnown RBP15.04■□□□□ -0
SFSWAP-201ENST00000261674 MTO1Q9Y2Z2 717 aaKnown RBP15.04■□□□□ -0
SFSWAP-201ENST00000261674 APOC4-APOC2K7ER74 178 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 TRPA1O75762 1119 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 ZBED1O96006 694 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 APOC2P02655 101 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 UBA1P22314 1058 aaKnown RBP15.04■□□□□ -0
SFSWAP-201ENST00000261674 AMPD1P23109 780 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 VHLP40337 213 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 SLC18A1P54219 525 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 ZC3H12AQ5D1E8 599 aaKnown RBP15.04■□□□□ -0
SFSWAP-201ENST00000261674 NDUFAF2Q8N183 169 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 TEX9Q8N6V9 391 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 SMC1BQ8NDV3 1235 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 APOPT1Q96IL0 206 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 MAFBQ9Y5Q3 323 aaPredicted RBP15.04■□□□□ -0
SFSWAP-201ENST00000261674 LOXHD1Q8IVV2 1947 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 ARHGAP42A6NI28 874 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 CLCN3P51790 818 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 GHRHRQ02643 423 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 RXFP2Q8WXD0 754 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 ZNF518BQ9C0D4 1074 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 KCNK13Q9HB14 408 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 RNF19AQ9NV58 838 aa15.04■□□□□ -0
SFSWAP-201ENST00000261674 ADGRA2Q96PE1 1338 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 CCDC189A1A4V9 331 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 MSCO60682 206 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 KRT37O76014 449 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 DLDP09622 509 aaKnown RBP15.03■□□□□ -0
SFSWAP-201ENST00000261674 UBTFL6P0CB48 400 aaPredicted RBP15.03■□□□□ -0
SFSWAP-201ENST00000261674 ASPAP45381 313 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 AQP5P55064 265 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 BCAR1P56945 870 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 CRHR2Q13324 411 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 RNF220Q5VTB9 566 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 XYLT1Q86Y38 959 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 PEBP4Q96S96 227 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 ACO2Q99798 780 aaKnown RBP15.03■□□□□ -0
SFSWAP-201ENST00000261674 KIAA1217Q5T5P2 1943 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 MED7O43513 233 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 HMGCRP04035 888 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 ZCCHC18P0CG32 403 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 C16orf46Q6P387 395 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 POLNQ7Z5Q5 900 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 C12orf29Q8N999 325 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 NRG4Q8WWG1 115 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 SLC44A1Q8WWI5 657 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 E2F7Q96AV8 911 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 MIS12Q9H081 205 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 RPF1Q9H9Y2 349 aaKnown RBP15.03■□□□□ -0
SFSWAP-201ENST00000261674 PPCSQ9HAB8 311 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 ASNSD1Q9NWL6 643 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 GINS2Q9Y248 185 aa15.03■□□□□ -0
SFSWAP-201ENST00000261674 MEI4A8MW99 385 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 MICAL2O94851 1124 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 PSMG1O95456 288 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 TRUB2O95900 331 aaKnown RBP15.02■□□□□ -0
SFSWAP-201ENST00000261674 NFICP08651 508 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 POLE2P56282 527 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 CRADDP78560 199 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 HSDL1Q3SXM5 330 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 TRMT10BQ6PF06 316 aaKnown RBP15.02■□□□□ -0
SFSWAP-201ENST00000261674 LRRC74BQ6ZQY2 392 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 ZNF784Q8NCA9 323 aaPredicted RBP15.02■□□□□ -0
SFSWAP-201ENST00000261674 MZB1Q8WU39 189 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 PCYT2Q99447 389 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 TSC22D3Q99576 134 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 SDCBP2Q9H190 292 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 PIDD1Q9HB75 910 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 SPATS2LQ9NUQ6 558 aaKnown RBP15.02■□□□□ -0
SFSWAP-201ENST00000261674 MAGED2Q9UNF1 606 aaPredicted RBP15.02■□□□□ -0
SFSWAP-201ENST00000261674 NFASCO94856 1347 aa15.02■□□□□ -0
SFSWAP-201ENST00000261674 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 NDC80O14777 642 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 SNRPAP09012 282 aaKnown RBP15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 ABCD1P33897 745 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 ADCYAP1R1P41586 468 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 PTPN11Q06124 597 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 PRKD1Q15139 912 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 ATF7IP2Q5U623 682 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms