RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 SLC2A4P14672 509 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PGAM1P18669 254 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 NUP107P57740 925 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 LAMTOR4Q0VGL1 99 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CDH17Q12864 832 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CNGA3Q16281 694 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PKN3Q6P5Z2 889 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 TEKT4Q8WW24 435 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CASKIN2Q8WXE0 1202 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 NSL1Q96IY1 281 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 TRMOQ9BU70 441 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 OSBPL6Q9BZF3 934 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 NDFIP2Q9NV92 336 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 INTS13Q9NVM9 706 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 USP18Q9UMW8 372 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 RGPD1P0DJD0 1748 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 TRIM49BA6NDI0 452 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SRP72O76094 671 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 POMCP01189 267 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SKIV2L2P42285 1042 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PTP4A2Q12974 167 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 STK4Q13043 487 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 NME3Q13232 169 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 AP1ARQ63HQ0 302 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 FETUBQ9UGM5 382 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 POLLQ9UGP5 575 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 RABGEF1Q9UJ41 708 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 RBP3P10745 1247 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 GTF2BQ00403 316 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 STARD3Q14849 445 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 NEK5Q6P3R8 708 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 GJD3Q8N144 294 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PDCD2LQ9BRP1 358 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 INPP5FQ9Y2H2 1132 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CRYL1Q9Y2S2 319 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SMIM35A0A1B0GVV1 85 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CD3EAPO15446 510 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CELF2O95319 508 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 FDPSP14324 419 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 OSTNP61366 133 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ARCQ7LC44 396 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CHSY1Q86X52 802 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 TCAIMQ8N3R3 496 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 C19orf60Q96EN9 201 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 RPRD1AQ96P16 312 aaPredicted RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ZNF670Q9BS34 389 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CLPBQ9H078 707 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SCUBE2Q9NQ36 999 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SCHIP1Q9P0W5 487 aaPredicted RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 MAGEC1O60732 1142 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CCNDBP1O95273 360 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SHMT1P34896 483 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ALDH5A1P51649 535 aaPredicted RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 DEFA1P59665 94 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 DEFA3P59666 94 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PAGE2BQ5JRK9 111 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 MYLK4Q86YV6 388 aaPredicted RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 FBXO32Q969P5 355 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CTNNAL1Q9UBT7 734 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 RPTORQ8N122 1335 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PIPSLA2A3N6 862 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 STX7O15400 261 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 KRT6AP02538 564 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 KRT6BP04259 564 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SERPINF2P08697 491 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 COMTP21964 271 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 RFC1P35251 1148 aaPredicted RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 KRT6CP48668 564 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 COPAP53621 1224 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PRKAA1Q13131 559 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 GRIK4Q16099 956 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CYB5D1Q6P9G0 228 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CHCHD4Q8N4Q1 142 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CEP295NLQ96MC4 621 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 HTATIP2Q9BUP3 242 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 VPS45Q9NRW7 570 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 TBC1D30Q9Y2I9 924 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 H3BRB1 525 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 GOLGA8RI6L899 631 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 BIRC5O15392 142 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 MAN1A2O60476 641 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CTDNEP1O95476 244 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 KCNA2P16389 499 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CYP2A7P20853 494 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PPP2R1BP30154 601 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ICAM3P32942 547 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 GPD2P43304 727 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SLC12A1Q13621 1099 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 NCAPHQ15003 741 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 RALGPS1Q5JS13 557 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 C10orf120Q5SQS8 335 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 TRPM8Q7Z2W7 1104 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ADAT2Q7Z6V5 191 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 TUT1Q9H6E5 874 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 MANSC1Q9H8J5 431 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 TMEM216Q9P0N5 145 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 A0A0G2JND7 137 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 CYB561D2O14569 222 aa4.44□□□□□ -1.7
VPS13C-202ENST00000261517 PPIBP23284 216 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms