RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 NCF2P19878 526 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-201ENST00000261443 TM4SF1P30408 202 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 SREBF1P36956 1147 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 PPARGP37231 505 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-201ENST00000261443 GPC3P51654 580 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 GDF10P55107 478 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 DYNLT1P63172 113 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 BASP1P80723 227 aaKnown RBP7.49□□□□□ -1.21
CSDE1-201ENST00000261443 CREB5Q02930 508 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 TUBB3Q13509 450 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 ZNF423Q2M1K9 1284 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 TFDP3Q5H9I0 405 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 MFSD4BQ5TF39 518 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 FRMD7Q6ZUT3 714 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 MON1BQ7L1V2 547 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 ARMCX6Q7L4S7 300 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 RSPH3Q86UC2 560 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 SLC26A11Q86WA9 606 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 ADCY4Q8NFM4 1077 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 RSAD2Q8WXG1 361 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 ACSF2Q96CM8 615 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-201ENST00000261443 NACC1Q96RE7 527 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 PAIP1Q9H074 479 aaKnown RBP7.49□□□□□ -1.21
CSDE1-201ENST00000261443 SAE1Q9UBE0 346 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-201ENST00000261443 PACSIN3Q9UKS6 424 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 DNAJC16Q9Y2G8 782 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 TRIM17Q9Y577 477 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 NR2E3Q9Y5X4 410 aa7.49□□□□□ -1.21
CSDE1-201ENST00000261443 ADAM23O75077 832 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ADRB2P07550 413 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 BPGMP07738 259 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 GSTT2P0CG29 244 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 GSTT2BP0CG30 244 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ACAT1P24752 427 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 RPL22P35268 128 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ECE1P42892 770 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 BCAP31P51572 246 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 STAT2P52630 851 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 SLC5A3P53794 718 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 MRPS22P82650 360 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 LGSNQ5TDP6 509 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 OTOP1Q7RTM1 612 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 LZTR1Q8N653 840 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 FBXL13Q8NEE6 735 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 PIWIL2Q8TC59 973 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 TAS1R2Q8TE23 839 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 TFB1MQ8WVM0 346 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 NLRP7Q8WX94 980 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 PPP1R10Q96QC0 940 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 KLC2Q9H0B6 622 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 KCND2Q9NZV8 630 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ARHGAP26Q9UNA1 814 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 EXOC7Q9UPT5 735 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 FAM32AQ9Y421 112 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ZHX2Q9Y6X8 837 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 IVNS1ABPQ9Y6Y0 642 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 PLIN4Q96Q06 1357 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 hCG_1818297A0A087WSY0 165 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 IGKV6D-41A0A0C4DH26 115 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 SSTR3P32745 418 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ZNF362Q5T0B9 420 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 PDPK2PQ6A1A2 396 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 NANOGNBQ7Z5D8 188 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 CBWD2Q8IUF1 395 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 TMEM126BQ8IUX1 230 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 DDHD1Q8NEL9 900 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 CASP10Q92851 521 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 CFAP36Q96G28 342 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 MMP19Q99542 508 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 DCUN1D5Q9BTE7 237 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 PI4K2AQ9BTU6 479 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 EIF2AQ9BY44 585 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 CAAP1Q9H8G2 361 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 TMEM8AQ9HCN3 771 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 XPNPEP1Q9NQW7 623 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 HOMER2Q9NSB8 354 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 IGSF9Q9P2J2 1179 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 PPP1R1BQ9UD71 204 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 IP6K2Q9UHH9 426 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 PCDHB2Q9Y5E7 798 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 SCINQ9Y6U3 715 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 FOXD2O60548 495 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 LYPLA1O75608 230 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 FOSP01100 380 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ZNF12P17014 697 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 HMOX2P30519 316 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 HOXA13P31271 388 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 DSG3P32926 999 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ALDH3B2P48448 385 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 SNAP25P60880 206 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 PSMC5P62195 406 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 PICALMQ13492 652 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ITGA7Q13683 1181 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 BMPR2Q13873 1038 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 PDE1CQ14123 709 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 SNRNP35Q16560 246 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ANGEL2Q5VTE6 544 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 DCDC5Q6ZRR9 648 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 FASTKD5Q7L8L6 764 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 TICAM1Q8IUC6 712 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms