RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 MPP4Q96JB8 637 aa16.52■□□□□ 0.23
LMNB1-201ENST00000261366 NTPCRQ9BSD7 190 aaKnown RBP16.52■□□□□ 0.23
LMNB1-201ENST00000261366 SOX13Q9UN79 622 aa16.52■□□□□ 0.23
LMNB1-201ENST00000261366 NR2E3Q9Y5X4 410 aa16.52■□□□□ 0.23
LMNB1-201ENST00000261366 CREB3O43889 395 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 F7P08709 466 aaPredicted RBP16.51■□□□□ 0.23
LMNB1-201ENST00000261366 ATP6V1B1P15313 513 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 TBXAS1P24557 533 aaPredicted RBP16.51■□□□□ 0.23
LMNB1-201ENST00000261366 MIPP30301 263 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 CDH6P55285 790 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 CDH8P55286 799 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 MSLNQ13421 630 aaPredicted RBP16.51■□□□□ 0.23
LMNB1-201ENST00000261366 PPP1R36Q96LQ0 422 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 CYP26B1Q9NR63 512 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.51■□□□□ 0.23
LMNB1-201ENST00000261366 DDX18Q9NVP1 670 aaKnown RBP16.51■□□□□ 0.23
LMNB1-201ENST00000261366 TCRBV5S1A1TA0A578 114 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 HNRNPRO43390 633 aaKnown RBP16.51■□□□□ 0.23
LMNB1-201ENST00000261366 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
LMNB1-201ENST00000261366 RFPL1O75677 317 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 YWHAZP63104 245 aaKnown RBP16.51■□□□□ 0.23
LMNB1-201ENST00000261366 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 OLFML2BQ68BL8 750 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 DPY19L2Q6NUT2 758 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 MPP5Q8N3R9 675 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 AZIN2Q96A70 460 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 CAMKK2Q96RR4 588 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 XAB2Q9HCS7 855 aaKnown RBP16.51■□□□□ 0.23
LMNB1-201ENST00000261366 PREBQ9HCU5 417 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 ARHGAP28Q9P2N2 729 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 FETUBQ9UGM5 382 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 HERC5Q9UII4 1024 aaKnown RBP16.51■□□□□ 0.23
LMNB1-201ENST00000261366 TTLL3Q9Y4R7 772 aa16.51■□□□□ 0.23
LMNB1-201ENST00000261366 CAPN8A6NHC0 703 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 KRT19P08727 400 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 RAG1P15918 1043 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 CRADDP78560 199 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 BTKQ06187 659 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 SCYL2Q6P3W7 929 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 RSBN1LQ6PCB5 846 aaPredicted RBP16.5■□□□□ 0.23
LMNB1-201ENST00000261366 PDSS2Q86YH6 399 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.5■□□□□ 0.23
LMNB1-201ENST00000261366 FAM172AQ8WUF8 416 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 NAT14Q8WUY8 206 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 ACSS2Q9NR19 701 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 RHBDL2Q9NX52 303 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 PCDHGB4Q9UN71 923 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 POLIQ9UNA4 740 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 PCDHGB5Q9Y5G0 923 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 DGAT1O75907 488 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 KRT7P08729 469 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 VCLP18206 1134 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 INHBCP55103 352 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 BAATQ14032 418 aaPredicted RBP16.5■□□□□ 0.23
LMNB1-201ENST00000261366 PPP6R3Q5H9R7 873 aaPredicted RBP16.5■□□□□ 0.23
LMNB1-201ENST00000261366 BSPRYQ5W0U4 402 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 PAOXQ6QHF9 649 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 DEFB107AQ8IZN7 70 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 TTC13Q8NBP0 860 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 WNK4Q96J92 1243 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 HIC2Q96JB3 615 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 CPXM1Q96SM3 734 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 MAN1C1Q9NR34 630 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 IL1RAPL1Q9NZN1 696 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 LMCD1Q9NZU5 365 aa16.5■□□□□ 0.23
LMNB1-201ENST00000261366 SFNP31947 248 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 GRIA1P42261 906 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 EMC2Q15006 297 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 TEX44Q53QW1 395 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 ZC3H12AQ5D1E8 599 aaKnown RBP16.49■□□□□ 0.23
LMNB1-201ENST00000261366 MCF2L2Q86YR7 1114 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 C7orf26Q96N11 449 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 PHF12Q96QT6 1004 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 AK5Q9Y6K8 562 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 VAV1P15498 845 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 CPOXP36551 454 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 PTGER2P43116 358 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 USP46P62068 366 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 TRPC3Q13507 836 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 CCNIQ14094 377 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 PDK3Q15120 406 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 C15orf59Q2T9L4 293 aaPredicted RBP16.49■□□□□ 0.23
LMNB1-201ENST00000261366 CASC4Q6P4E1 433 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 FBXL19Q6PCT2 694 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 MCPH1Q8NEM0 835 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 ATP6V0A1Q93050 837 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 CGRRF1Q99675 332 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 KLHL4Q9C0H6 718 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 IFT122Q9HBG6 1241 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 PXMP2Q9NR77 195 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 PNPOQ9NVS9 261 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 ZNF70Q9UC06 446 aaPredicted RBP16.49■□□□□ 0.23
LMNB1-201ENST00000261366 RIPK3Q9Y572 518 aa16.49■□□□□ 0.23
LMNB1-201ENST00000261366 APOC4-APOC2K7ER74 178 aa16.48■□□□□ 0.23
LMNB1-201ENST00000261366 APOC2P02655 101 aa16.48■□□□□ 0.23
LMNB1-201ENST00000261366 RBL1P28749 1068 aa16.48■□□□□ 0.23
LMNB1-201ENST00000261366 FASTKD1Q53R41 847 aaKnown RBP16.48■□□□□ 0.23
LMNB1-201ENST00000261366 ACAD11Q709F0 780 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms