RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CDH22Q9UJ99 828 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 XIRP2A4UGR9 3374 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 ZNF840PA6NDX5 716 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 TMEM191CA6NGB0 347 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 USP27XA6NNY8 438 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 BTNL10A8MVZ5 291 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 DAB1O75553 588 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 MYL4P12829 197 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 HOXB8P17481 243 aaPredicted RBP16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 TCEAL1Q15170 157 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 CCDC85BQ15834 202 aaPredicted RBP16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 SNX30Q5VWJ9 437 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 SYPL2Q5VXT5 272 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 DCUN1D2Q6PH85 259 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 ZNF662Q6ZS27 426 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 ARCQ7LC44 396 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 REXO1L1PQ8IX06 675 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 RHOT2Q8IXI1 618 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 DEFB106AQ8N104 65 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 ARHGAP18Q8N392 663 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 TXLNBQ8N3L3 684 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 ZNF564Q8TBZ8 553 aaPredicted RBP16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 KIAA1524Q8TCG1 905 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 SLC2A13Q96QE2 648 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 PIDD1Q9HB75 910 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 LZTFL1Q9NQ48 299 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 RRAGDQ9NQL2 400 aaPredicted RBP16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 TRMT1Q9NXH9 659 aaKnown RBP16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 NAALADL1Q9UQQ1 740 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 ZKSCAN5Q9Y2L8 839 aa16.55■□□□□ 0.24
CCDC90B-201ENST00000260054 A0A0A6YYK5 440 aaPredicted RBP16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 A0A1W2PRU2 124 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 C2CD4BA6NLJ0 364 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 GJA1P17302 382 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 OGDHQ02218 1023 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 SLC5A9Q2M3M2 681 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 BTBD8Q5XKL5 378 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 PDZD4Q76G19 769 aaPredicted RBP16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 GPR149Q86SP6 731 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 CCAR2Q8N163 923 aaKnown RBP16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 GOLGA1Q92805 767 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 TCEAL4Q96EI5 215 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 BTBD6Q96KE9 485 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 ABCC13Q9NSE7 274 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 CLIC5Q9NZA1 410 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 TRPM5Q9NZQ8 1165 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 ANAPC7Q9UJX3 599 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 NUDT5Q9UKK9 219 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 NOTCH4Q99466 2003 aa16.54■□□□□ 0.24
CCDC90B-201ENST00000260054 BRWD1Q9NSI6 2320 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 MACROD2A1Z1Q3 448 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 ZSCAN12O43309 604 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 BUB1O43683 1085 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 MOSPD3O75425 235 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 MTA2O94776 668 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 NCAM1P13591 858 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 RARGP13631 454 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 MATKP42679 507 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 PPP3CCP48454 512 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 PSEN1P49768 467 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 PITX1P78337 314 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 CYP4F8P98187 520 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 ZNF252P-AS1Q0IIN9 211 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 DCAF6Q58WW2 860 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 PRSS36Q5K4E3 855 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 BEND5Q7L4P6 421 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 C17orf53Q8N3J3 647 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 LEMD2Q8NC56 503 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 RXFP2Q8WXD0 754 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 MSLNLQ96KJ4 702 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 CFAP57Q96MR6 1250 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 ADAM33Q9BZ11 813 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 TSGA10Q9BZW7 698 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 S1PR5Q9H228 398 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 ATXN3LQ9H3M9 355 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 CCSER2Q9H7U1 834 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 PAXBP1Q9Y5B6 917 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 C2orf16Q68DN1 1984 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 C2orf78A6NCI8 922 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 CAPN9O14815 690 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 KRT86O43790 486 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 PDGFRAP16234 1089 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 CDC25CP30307 473 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 NOS2P35228 1153 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 NOP2P46087 812 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 ARHGAP29Q52LW3 1261 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 SHKBP1Q8TBC3 707 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 DDX23Q9BUQ8 820 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 TRIM62Q9BVG3 475 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 ADAM7Q9H2U9 754 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 GUCA1BQ9UMX6 200 aa16.53■□□□□ 0.24
CCDC90B-201ENST00000260054 PRUNE2Q8WUY3 3088 aa16.52■□□□□ 0.24
CCDC90B-201ENST00000260054 TLR5O60602 858 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 FGF19O95750 216 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 TBX18O95935 607 aa16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 TFE3P19532 575 aaPredicted RBP16.52■□□□□ 0.23
CCDC90B-201ENST00000260054 GPD1P21695 349 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms