RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 STXBP5Q5T5C0 1151 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 CCNJQ5T5M9 372 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 NSMFQ6X4W1 530 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 CATSPERGQ6ZRH7 1159 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 C1orf122Q6ZSJ8 110 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 C16orf86Q6ZW13 317 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 WDR49Q8IV35 697 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 MAPKAPK5Q8IW41 473 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 PGBD3Q8N328 593 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 DNAAF3Q8N9W5 541 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 ICA1LQ8NDH6 482 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 PLEKHF1Q96S99 279 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 CDADC1Q9BWV3 514 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 LIN28AQ9H9Z2 209 aaKnown RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 PARVAQ9NVD7 372 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 SYBUQ9NX95 663 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 PRKAG3Q9UGI9 489 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 CHTOPQ9Y3Y2 248 aaKnown RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 HMX3A6NHT5 357 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 H0YJX3 145 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 TM9SF1O15321 606 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 NOS1APO75052 506 aaPredicted RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 SOCS5O75159 536 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 NOS3P29474 1203 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 TPTEP56180 551 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 CARD18P57730 90 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 DSG1Q02413 1049 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 FOLH1Q04609 750 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 GRIN1Q05586 938 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 GRSF1Q12849 480 aaKnown RBP eCLIP8□□□□□ -1.13
GPNMB-201ENST00000258733 KCNAB2Q13303 367 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 SLX4IPQ5VYV7 408 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 NANOGP8Q6NSW7 305 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 RWDD4Q6NW29 188 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 SEZ6L2Q6UXD5 910 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 C15orf52Q6ZUT6 534 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 TRMT44Q8IYL2 757 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 AVL9Q8NBF6 648 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 PCSK9Q8NBP7 692 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 UPF1Q92900 1129 aaKnown RBP eCLIP8□□□□□ -1.13
GPNMB-201ENST00000258733 SLC22A18Q96BI1 424 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 PHACTR3Q96KR7 559 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 TBATAQ96M53 351 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 SERPINB12Q96P63 405 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 WRNIP1Q96S55 665 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 CDK5RAP1Q96SZ6 601 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 SLC4A5Q9BY07 1137 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 PACSIN1Q9BY11 444 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 IFIH1Q9BYX4 1025 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 MROH8Q9H579 483 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 HSPBP1Q9NZL4 362 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 CNOT8Q9UFF9 292 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 CNOT7Q9UIV1 285 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 FBXL21Q9UKT6 434 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 ENTPD4Q9Y227 616 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF330Q9Y3S2 320 aaPredicted RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 ADGRB1O14514 1584 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 QRICH2Q9H0J4 1663 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 TP73O15350 636 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 NUPL2O15504 423 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 GH2P01242 217 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 ATP6V1B1P15313 513 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 NPR3P17342 541 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 EEF1GP26641 437 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 CTNNB1P35222 781 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 NOS2P35228 1153 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 RAD52P43351 418 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 MTIF2P46199 727 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 RNF144AP50876 292 aaPredicted RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 GALK2Q01415 458 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 ABRQ12979 859 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 MXD4Q14582 209 aaPredicted RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 TRIP13Q15645 432 aaPredicted RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 NADK2Q4G0N4 442 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 CEP55Q53EZ4 464 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 XKR3Q5GH77 459 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 TNFAIP8L3Q5GJ75 292 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 OGFOD2Q6N063 350 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 LARP1Q6PKG0 1096 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF852Q6ZMS4 543 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 TC2NQ8N9U0 490 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 TERB1Q8NA31 727 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 XXYLT1Q8NBI6 393 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 URGCPQ8TCY9 931 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 PAGE5Q96GU1 130 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF668Q96K58 619 aaPredicted RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 BRIP1Q9BX63 1249 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 LRMDAQ9H2I8 198 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8□□□□□ -1.13
GPNMB-201ENST00000258733 ZDHHC4Q9NPG8 344 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 TLR7Q9NYK1 1049 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 GNPTGQ9UJJ9 305 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 AFG3L2Q9Y4W6 797 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 MAP3K15Q6ZN16 1313 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 CAPN9O14815 690 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 RNMTO43148 476 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 KRT86O43790 486 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 OR7A10O76100 309 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 ALBP02768 609 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms