RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 TNFAIP8O95379 198 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 PDGFRAP16234 1089 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 SPIRE1Q08AE8 756 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 CCDC92Q53HC0 331 aaPredicted RBP12.76□□□□□ -0.37
USP30-201ENST00000257548 CDHR3Q6ZTQ4 885 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 ENOSF1Q7L5Y1 443 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 C12orf50Q8NA57 414 aaPredicted RBP12.76□□□□□ -0.37
USP30-201ENST00000257548 SLC7A3Q8WY07 619 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 CD101Q93033 1021 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 POLR3FQ9H1D9 316 aaPredicted RBP12.76□□□□□ -0.37
USP30-201ENST00000257548 ATF5Q9Y2D1 282 aaPredicted RBP12.76□□□□□ -0.37
USP30-201ENST00000257548 GOLGA8TH3BQL2 631 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 M0QYV0 167 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 TYROBPO43914 113 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 ZNF862O60290 1169 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 TMEM63AO94886 807 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 MUTP22033 750 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 IL1RL1Q01638 556 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 POU5F1BQ06416 359 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 ZNF699Q32M78 642 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 ZC3H12AQ5D1E8 599 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 PCDH20Q8N6Y1 951 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 BANPQ8N9N5 519 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 SHKBP1Q8TBC3 707 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 HELQQ8TDG4 1101 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 DENND1AQ8TEH3 1009 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 EXT2Q93063 718 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 XPNPEP1Q9NQW7 623 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 DDX56Q9NY93 547 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 SSX2IPQ9Y2D8 614 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 HEMK1Q9Y5R4 338 aaPredicted RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 DLDP09622 509 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 FDFT1P37268 417 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 NT5C2P49902 561 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 TSPY1Q01534 308 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 CYP24A1Q07973 514 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 PIGHQ14442 188 aaPredicted RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 HABP4Q5JVS0 413 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 TRIM50Q86XT4 487 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 BHLHE22Q8NFJ8 381 aaPredicted RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 DCUN1D1Q96GG9 259 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 WDR55Q9H6Y2 383 aaPredicted RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 SLC17A6Q9P2U8 582 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 SAC3D1A6NKF1 404 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 KDM1AO60341 852 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 TRMUO75648 421 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 MAP4P27816 1152 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 NME5P56597 212 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 TFDP2Q14188 446 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 DPYSL3Q14195 570 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 RNASEH2BQ5TBB1 312 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 KLHDC10Q6PID8 442 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 PATL1Q86TB9 770 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 MPHOSPH6Q99547 160 aaKnown RBP12.75□□□□□ -0.37
USP30-201ENST00000257548 CCDC90BQ9GZT6 254 aa12.75□□□□□ -0.37
USP30-201ENST00000257548 C1orf232A0A0U1RR37 186 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 ASLP04424 464 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 RALBP11234 206 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 PCYT1AP49585 367 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 CLK2P49760 499 aaKnown RBP12.74□□□□□ -0.37
USP30-201ENST00000257548 GTF2A2P52657 109 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 EFHC2Q5JST6 749 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 TRIM72Q6ZMU5 477 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 KDELC2Q7Z4H8 507 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 FAM136AQ96C01 138 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 CDCA7Q9BWT1 371 aaPredicted RBP12.74□□□□□ -0.37
USP30-201ENST00000257548 THAP1Q9NVV9 213 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 SELENONQ9NZV5 590 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 STRIP2Q9ULQ0 834 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 GNEQ9Y223 722 aaKnown RBP12.74□□□□□ -0.37
USP30-201ENST00000257548 NR2E3Q9Y5X4 410 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 CLUHO75153 1309 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 GMPRP36959 345 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 EIF2B2P49770 351 aaKnown RBP12.74□□□□□ -0.37
USP30-201ENST00000257548 TAF5Q15542 800 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 NEDD8Q15843 81 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 PRR5LQ6MZQ0 368 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 TTC33Q6PID6 262 aaPredicted RBP12.74□□□□□ -0.37
USP30-201ENST00000257548 ZNF354CQ86Y25 554 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 MYO1HQ8N1T3 1032 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 ATP6V0A1Q93050 837 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 CCDC138Q96M89 665 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 EFHD1Q9BUP0 239 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 PPCSQ9HAB8 311 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 FAM49BQ9NUQ9 324 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 POMPQ9Y244 141 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 COMMD10Q9Y6G5 202 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 ANKRD12Q6UB98 2062 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 DUOX1Q9NRD9 1551 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 PSMD10O75832 226 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 EPHA3P29320 983 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 ABCD1P33897 745 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 GARSP41250 739 aaKnown RBP12.74□□□□□ -0.37
USP30-201ENST00000257548 RAP1GAPP47736 663 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 SLC12A2P55011 1212 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 DAW1Q8N136 415 aa12.74□□□□□ -0.37
USP30-201ENST00000257548 NLRP4Q96MN2 994 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms