RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 IGF2BP3O00425 579 aaKnown RBP eCLIP19.56■□□□□ 0.72
PTPRE-201ENST00000254667 MAPK1P28482 360 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 MZF1P28698 734 aaPredicted RBP19.56■□□□□ 0.72
PTPRE-201ENST00000254667 CDCA5Q96FF9 252 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 TMEM121Q9BTD3 319 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 XPNPEP3Q9NQH7 507 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 ADGRB2O60241 1585 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 SLCO1B7G3V0H7 640 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 PIK3CDO00329 1044 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 LZTS3O60299 673 aaPredicted RBP19.56■□□□□ 0.72
PTPRE-201ENST00000254667 SUPT7LO94864 414 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 DNAJC3Q13217 504 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 PRDM16Q9HAZ2 1276 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 ADM5C9JUS6 153 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 CYTH3O43739 400 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 YWHAZP63104 245 aaKnown RBP19.56■□□□□ 0.72
PTPRE-201ENST00000254667 GRAMD4Q6IC98 578 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 ACTL9Q8TC94 416 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 FICDQ9BVA6 458 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 GLIS2Q9BZE0 524 aaPredicted RBP19.56■□□□□ 0.72
PTPRE-201ENST00000254667 ELOVL4Q9GZR5 314 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 CDC42EP4Q9H3Q1 356 aaKnown RBP19.56■□□□□ 0.72
PTPRE-201ENST00000254667 TBC1D12O60347 775 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 DUSP9Q99956 384 aaKnown RBP19.56■□□□□ 0.72
PTPRE-201ENST00000254667 IARS2Q9NSE4 1012 aaKnown RBP19.56■□□□□ 0.72
PTPRE-201ENST00000254667 FAM198AQ9UFP1 575 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 CNTNAP2Q9UHC6 1331 aa19.56■□□□□ 0.72
PTPRE-201ENST00000254667 OCM2P0CE71 109 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 OCMP0CE72 109 aaPredicted RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 VCLP18206 1134 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 EIF4BP23588 611 aaKnown RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 SERPINB10P48595 397 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 RHBDL3P58872 404 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 SGO1Q5FBB7 561 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 DAB2IPQ5VWQ8 1189 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 CATSPERGQ6ZRH7 1159 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 SUGP1Q8IWZ8 645 aaKnown RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 SGF29Q96ES7 293 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 SERPINB11Q96P15 392 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 PAFAH2Q99487 392 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 NFASCO94856 1347 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 TRIM16O95361 564 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 NR2C2P49116 596 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 DYNC1I2Q13409 638 aaKnown RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 TP53BP2Q13625 1128 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 ITGA9Q13797 1035 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 EPS8L3Q8TE67 593 aaKnown RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 TMBIM4Q9HC24 238 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 DMAP1Q9NPF5 467 aaPredicted RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 RUVBL2Q9Y230 463 aaKnown RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 AK9Q5TCS8 1911 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 INHBEP58166 350 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 DMC1Q14565 340 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 RETSATQ6NUM9 610 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 DTX3LQ8TDB6 740 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 PHTF1Q9UMS5 762 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 GRK2P25098 689 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 AMPD2Q01433 879 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 MGAT5Q09328 741 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 EIF2B5Q13144 721 aaKnown RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 LRRC23Q53EV4 343 aaPredicted RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 TMEM86AQ8N2M4 240 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 FBXO25Q8TCJ0 367 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 HASPINQ8TF76 798 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 SRPK1Q96SB4 655 aaKnown RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 PORCNQ9H237 461 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 EML1O00423 815 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 RTN3O95197 1032 aaPredicted RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 FSCN1Q16658 493 aaKnown RBP19.55■□□□□ 0.72
PTPRE-201ENST00000254667 ARHGEF19Q8IW93 802 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 TRIM48Q8IWZ4 208 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 ZNF333Q96JL9 665 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 ADNPQ9H2P0 1102 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 KCNMB3Q9NPA1 279 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 NMRK2Q9NPI5 230 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 ACOT9Q9Y305 439 aa19.55■□□□□ 0.72
PTPRE-201ENST00000254667 CABYRO75952 493 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 GLP2RO95838 553 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 HMGCRP04035 888 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 SEC24CP53992 1094 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 CNTN2Q02246 1040 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 VSIG10LQ86VR7 867 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 COLGALT1Q8NBJ5 622 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 BHMTQ93088 406 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 CAVIN3Q969G5 261 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 YIPF2Q9BWQ6 316 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 GANQ9H2C0 597 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 STN1Q9H668 368 aaKnown RBP19.54■□□□□ 0.72
PTPRE-201ENST00000254667 LACTBL1A8MY62 500 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 PJA2O43164 708 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 ANXA11P50995 505 aaKnown RBP19.54■□□□□ 0.72
PTPRE-201ENST00000254667 ITIH4Q14624 930 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 MARC1Q5VT66 337 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 TRHDEQ9UKU6 1024 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 MROH7Q68CQ1 1323 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 KIF1AQ12756 1690 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 CYP3A7-CYP3A51PA0A087WV96 503 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 NPM3O75607 178 aaKnown RBP19.54■□□□□ 0.72
PTPRE-201ENST00000254667 MICAL2O94851 1124 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 MAP3K6O95382 1288 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms