RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 A8MX80 341 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 PECAM1P16284 738 aaPredicted RBP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 SPARCL1Q14515 664 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 ZBTB6Q15916 424 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 EML3Q32P44 896 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 FUT10Q6P4F1 479 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 PNPLA1Q8N8W4 532 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 CCDC110Q8TBZ0 833 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 TRIM43Q96BQ3 446 aaPredicted RBP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 PEBP4Q96S96 227 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 LGMNQ99538 433 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 SNRNP25Q9BV90 132 aaKnown RBP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 NEUROG2Q9H2A3 272 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 GKN1Q9NS71 199 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 TRPM7Q96QT4 1865 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 GABBR2O75899 941 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 PFKMP08237 780 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 CTNNA1P35221 906 aaKnown RBP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 EIF3EP60228 445 aaKnown RBP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 CRADDP78560 199 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 GAD2Q05329 585 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 DMTNQ08495 405 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 GRIK3Q13003 919 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 PLD1Q13393 1074 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 OLIG2Q13516 323 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 P3H1Q32P28 736 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 CCDC14Q49A88 953 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 C12orf76Q8N812 135 aaPredicted RBP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 ING5Q8WYH8 240 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 FBXO32Q969P5 355 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 MAF1Q9H063 256 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 UPF3AQ9H1J1 476 aaKnown RBP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 VPS37BQ9H9H4 285 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 ETNK2Q9NVF9 386 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 ZBED1O96006 694 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 PAEPP09466 180 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 GBE1Q04446 702 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 RSPO2Q6UXX9 243 aaPredicted RBP12.13□□□□□ -0.47
LIN28A-201ENST00000254231 RNF19BQ6ZMZ0 732 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 CXorf38Q8TB03 319 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 ARNTL2Q8WYA1 636 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 MCOLN1Q9GZU1 580 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 TKTL2Q9H0I9 626 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 WDCPQ9H6R7 721 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 ENTPD7Q9NQZ7 604 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 IL1RAPL1Q9NZN1 696 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 VANGL2Q9ULK5 521 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 AP4E1Q9UPM8 1137 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 NUMA1Q14980 2115 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 LOC285556D6RIA3 1793 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 APRTP07741 180 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 ARL4AP40617 200 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 LHX1P48742 406 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 SLC5A3P53794 718 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 USP46P62068 366 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 MYLIPQ8WY64 445 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 TRIM56Q9BRZ2 755 aaKnown RBP12.13□□□□□ -0.47
LIN28A-201ENST00000254231 DNAI2Q9GZS0 605 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 CHST12Q9NRB3 414 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 OGFRQ9NZT2 677 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 PCDHA3Q9Y5H8 950 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 LOXHD1Q8IVV2 1947 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.13□□□□□ -0.47
LIN28A-201ENST00000254231 A0A1W2PQH9 124 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 MIF4GDA9UHW6 222 aaKnown RBP12.13□□□□□ -0.47
LIN28A-201ENST00000254231 TLL1O43897 1013 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 AVILO75366 819 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 ATF2P15336 505 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 IGFBP4P22692 258 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 OAS2P29728 719 aaKnown RBP12.13□□□□□ -0.47
LIN28A-201ENST00000254231 SEMG2Q02383 582 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 MGAT3Q09327 533 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 TAF10Q12962 218 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 POM121L1PQ3SYA9 428 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 PLEKHA7Q6IQ23 1121 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 ALKAL1Q6UXT8 129 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 SPOCD1Q6ZMY3 1216 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 C16orf59Q7L2K0 433 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 PHF13Q86YI8 300 aaPredicted RBP12.13□□□□□ -0.47
LIN28A-201ENST00000254231 SPNS2Q8IVW8 549 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 ARFGAP1Q8N6T3 406 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 NAP1L3Q99457 506 aaPredicted RBP12.13□□□□□ -0.47
LIN28A-201ENST00000254231 COLEC11Q9BWP8 271 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 DUSP16Q9BY84 665 aa12.13□□□□□ -0.47
LIN28A-201ENST00000254231 CWC15Q9P013 229 aaKnown RBP12.13□□□□□ -0.47
LIN28A-201ENST00000254231 GOLGA6BA6NDN3 693 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 SIGLEC16A6NMB1 481 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 GAS8O95995 478 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 KCNE1P15382 129 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 CXCR3P49682 368 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 TCEA2Q15560 299 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 KYNUQ16719 465 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 RFWD3Q6PCD5 774 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 FBXO46Q6PJ61 603 aaPredicted RBP12.12□□□□□ -0.47
LIN28A-201ENST00000254231 DCLRE1AQ6PJP8 1040 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 TPGS1Q6ZTW0 290 aa12.12□□□□□ -0.47
LIN28A-201ENST00000254231 PAQR9Q6ZVX9 377 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms