RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 RAB21Q9UL25 225 aa15.52■□□□□ 0.07
UBE4B-201ENST00000253251 L3MBTL1Q9Y468 752 aa15.52■□□□□ 0.07
UBE4B-201ENST00000253251 COL1A1P02452 1464 aaPredicted RBP15.52■□□□□ 0.07
UBE4B-201ENST00000253251 TMEM120BA0PK00 339 aa15.52■□□□□ 0.07
UBE4B-201ENST00000253251 DARSP14868 501 aaKnown RBP15.52■□□□□ 0.07
UBE4B-201ENST00000253251 PSEN1P49768 467 aa15.52■□□□□ 0.07
UBE4B-201ENST00000253251 ABCE1P61221 599 aaKnown RBP15.52■□□□□ 0.07
UBE4B-201ENST00000253251 WDR59Q6PJI9 974 aa15.52■□□□□ 0.07
UBE4B-201ENST00000253251 RNF135Q8IUD6 432 aa15.52■□□□□ 0.07
UBE4B-201ENST00000253251 GPATCH2LQ9NWQ4 482 aa15.52■□□□□ 0.07
UBE4B-201ENST00000253251 PCDHA2Q9Y5H9 948 aa15.52■□□□□ 0.07
UBE4B-201ENST00000253251 DOT1LQ8TEK3 1739 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 APOC4-APOC2K7ER74 178 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 APOC2P02655 101 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 RHOCP08134 193 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 HSDL1Q3SXM5 330 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 TTLL9Q3SXZ7 439 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.51■□□□□ 0.07
UBE4B-201ENST00000253251 PRUNE1Q86TP1 453 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 ANKRD52Q8NB46 1076 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 SNX19Q92543 992 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 GBP5Q96PP8 586 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 USP15Q9Y4E8 981 aaPredicted RBP15.51■□□□□ 0.07
UBE4B-201ENST00000253251 RPS6KL1Q9Y6S9 549 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 MAP3K7O43318 606 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 H2AFYO75367 372 aaKnown RBP15.51■□□□□ 0.07
UBE4B-201ENST00000253251 MAP4P27816 1152 aaKnown RBP15.51■□□□□ 0.07
UBE4B-201ENST00000253251 PRAMEF19Q5SWL8 479 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 NLRP9Q7RTR0 991 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 TMC7Q7Z402 723 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 KDELC2Q7Z4H8 507 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 DEFB106AQ8N104 65 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 SLC25A41Q8N5S1 370 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 PDZD8Q8NEN9 1154 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 TASP1Q9H6P5 420 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 COL20A1Q9P218 1284 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 RGPD2P0DJD1 1756 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 NUP188Q5SRE5 1749 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 FRMD3A2A2Y4 597 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 GLRA3O75311 464 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 NPR3P17342 541 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 RRP1BQ14684 758 aaKnown RBP15.51■□□□□ 0.07
UBE4B-201ENST00000253251 MTFR1Q15390 333 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 KDM7AQ6ZMT4 941 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 DEFB128Q7Z7B8 93 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 CCDC126Q96EE4 140 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 PRMT1Q99873 361 aaKnown RBP15.51■□□□□ 0.07
UBE4B-201ENST00000253251 SMYD3Q9H7B4 428 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 PCMTD2Q9NV79 361 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 USP20Q9Y2K6 914 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 CDY1Q9Y6F8 540 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 PKD1L3Q7Z443 1732 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 DNALI1O14645 258 aaPredicted RBP15.51■□□□□ 0.07
UBE4B-201ENST00000253251 FLT3LGP49771 235 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 FAM83EQ2M2I3 478 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 PTRHD1Q6GMV3 140 aaKnown RBP15.51■□□□□ 0.07
UBE4B-201ENST00000253251 POLNQ7Z5Q5 900 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 FBXO25Q8TCJ0 367 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 HASPINQ8TF76 798 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 PDGFCQ9NRA1 345 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 ZNF112Q9UJU3 913 aa15.51■□□□□ 0.07
UBE4B-201ENST00000253251 MTO1Q9Y2Z2 717 aaKnown RBP15.51■□□□□ 0.07
UBE4B-201ENST00000253251 SF3B1O75533 1304 aaKnown RBP eCLIP15.5■□□□□ 0.072e-6■■■■■ 105.4
UBE4B-201ENST00000253251 PGK1P00558 417 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 ACAT1P24752 427 aaKnown RBP15.5■□□□□ 0.07
UBE4B-201ENST00000253251 ZNF143P52747 638 aaPredicted RBP15.5■□□□□ 0.07
UBE4B-201ENST00000253251 SYTL3Q4VX76 610 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 PABPC1LQ4VXU2 614 aaKnown RBP15.5■□□□□ 0.07
UBE4B-201ENST00000253251 NOMO2Q5JPE7 1267 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 DCLRE1AQ6PJP8 1040 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 DENND5BQ6ZUT9 1274 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 FBXO36Q8NEA4 188 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 WNT8BQ93098 351 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 FUT8Q9BYC5 575 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 CYP4F11Q9HBI6 524 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 SLC25A13Q9UJS0 675 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 E5RJQ4 531 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 PMPCBO75439 489 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 MIPP30301 263 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 SCNN1GP51170 649 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 RETSATQ6NUM9 610 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 C4orf33Q8N1A6 199 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 SH2D3CQ8N5H7 860 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 MAML3Q96JK9 1138 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 CCT8L2Q96SF2 557 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 DCDC2Q9UHG0 476 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 CRYBG1Q9Y4K1 1723 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 M0R2N6 131 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 PYGMP11217 842 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 ARF4P18085 180 aaPredicted RBP15.5■□□□□ 0.07
UBE4B-201ENST00000253251 AKT1P31749 480 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 IFNA8P32881 189 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 HNRNPH2P55795 449 aaKnown RBP15.5■□□□□ 0.07
UBE4B-201ENST00000253251 SMARCB1Q12824 385 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 IRF2BP1Q8IU81 584 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 NTPCRQ9BSD7 190 aaKnown RBP15.5■□□□□ 0.07
UBE4B-201ENST00000253251 PRKD2Q9BZL6 878 aa15.5■□□□□ 0.07
UBE4B-201ENST00000253251 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.5■□□□□ 0.07
UBE4B-201ENST00000253251 DMGDHQ9UI17 866 aaKnown RBP15.5■□□□□ 0.07
UBE4B-201ENST00000253251 TIMM13Q9Y5L4 95 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms