RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 LRRC32Q14392 662 aa25.57■■□□□ 1.68
SDF2L1-201ENST00000248958 SKOR2Q2VWA4 1001 aaPredicted RBP25.57■■□□□ 1.68
SDF2L1-201ENST00000248958 KLHDC7AQ5VTJ3 777 aa25.57■■□□□ 1.68
SDF2L1-201ENST00000248958 ZNF687Q8N1G0 1237 aa25.57■■□□□ 1.68
SDF2L1-201ENST00000248958 PLCB1Q9NQ66 1216 aa25.57■■□□□ 1.68
SDF2L1-201ENST00000248958 LRRC10BA6NIK2 292 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 ZNF18P17022 549 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 GPD2P43304 727 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 COPB1P53618 953 aaKnown RBP25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 BPIFB4P59827 614 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 DGKKQ5KSL6 1271 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 C10orf120Q5SQS8 335 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 DPY19L2P1Q6NXN4 242 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 PMF1Q6P1K2 205 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 AOPEPQ8N6M6 819 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 STK32AQ8WU08 396 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 IRGQQ8WZA9 623 aa25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 LSM14BQ9BX40 385 aaKnown RBP25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 KLF16Q9BXK1 252 aaPredicted RBP25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 LSM7Q9UK45 103 aaKnown RBP25.56■■□□□ 1.68
SDF2L1-201ENST00000248958 FBXO21O94952 628 aa25.55■■□□□ 1.68
SDF2L1-201ENST00000248958 GJA4P35212 333 aa25.55■■□□□ 1.68
SDF2L1-201ENST00000248958 ACADSBP45954 432 aa25.55■■□□□ 1.68
SDF2L1-201ENST00000248958 FZD5Q13467 585 aa25.55■■□□□ 1.68
SDF2L1-201ENST00000248958 BTBD8Q5XKL5 378 aa25.55■■□□□ 1.68
SDF2L1-201ENST00000248958 ADGRG2Q8IZP9 1017 aa25.55■■□□□ 1.68
SDF2L1-201ENST00000248958 LINC00597Q9H2U6 94 aa25.55■■□□□ 1.68
SDF2L1-201ENST00000248958 LMAN1LQ9HAT1 526 aa25.55■■□□□ 1.68
SDF2L1-201ENST00000248958 OLA1Q9NTK5 396 aaKnown RBP25.55■■□□□ 1.68
SDF2L1-201ENST00000248958 F5P12259 2224 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 OTOL1A6NHN0 477 aaPredicted RBP25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 FOXN3O00409 490 aaPredicted RBP25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 TBX18O95935 607 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 CALCAP01258 141 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 CHRNB1P11230 501 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 LCP1P13796 627 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 UCHL3P15374 230 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 RPL34P49207 117 aaKnown RBP25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 DAOAP59103 153 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 COG7P83436 770 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 TCF15Q12870 199 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 RAPGEF1Q13905 1077 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 TXNDC11Q6PKC3 985 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 HTR3DQ70Z44 454 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 RSRC2Q7L4I2 434 aaKnown RBP25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 FAM71AQ8IYT1 594 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 SYNPOQ8N3V7 929 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 FUCA2Q9BTY2 467 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 ABCC13Q9NSE7 274 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 AJAP1Q9UKB5 411 aaPredicted RBP25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 STRIP2Q9ULQ0 834 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 PCDHGC3Q9UN70 934 aa25.54■■□□□ 1.68
SDF2L1-201ENST00000248958 TRDMT1O14717 391 aaKnown RBP25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 RGS7P49802 495 aa25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 ZNF165P49910 485 aa25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 DRAP1Q14919 205 aaPredicted RBP25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 PON2Q15165 354 aa25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 BHLHA9Q7RTU4 235 aa25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 C1orf210Q8IVY1 113 aa25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 GOLGA1Q92805 767 aa25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 NAA15Q9BXJ9 866 aaKnown RBP25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 STK33Q9BYT3 514 aa25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 CHRDQ9H2X0 955 aa25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 FHOD1Q9Y613 1164 aa25.53■■□□□ 1.68
SDF2L1-201ENST00000248958 LGALS16A8MUM7 142 aa25.52■■□□□ 1.68
SDF2L1-201ENST00000248958 SART1O43290 800 aaKnown RBP25.52■■□□□ 1.68
SDF2L1-201ENST00000248958 GRSF1Q12849 480 aaKnown RBP eCLIP25.52■■□□□ 1.689e-8■■■■□ 26.5
SDF2L1-201ENST00000248958 BSPRYQ5W0U4 402 aa25.52■■□□□ 1.68
SDF2L1-201ENST00000248958 MAMSTRQ6ZN01 415 aa25.52■■□□□ 1.68
SDF2L1-201ENST00000248958 RNF139Q8WU17 664 aa25.52■■□□□ 1.68
SDF2L1-201ENST00000248958 HSD3B7Q9H2F3 369 aa25.52■■□□□ 1.68
SDF2L1-201ENST00000248958 RASAL2Q9UJF2 1139 aa25.52■■□□□ 1.68
SDF2L1-201ENST00000248958 NUDT5Q9UKK9 219 aa25.52■■□□□ 1.68
SDF2L1-201ENST00000248958 ZNF510Q9Y2H8 683 aa25.52■■□□□ 1.68
SDF2L1-201ENST00000248958 SYCE3A1L190 88 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 ADH1CP00326 375 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 IRF1P10914 325 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 CLCN1P35523 988 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 EFEMP1Q12805 493 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 ANGPT1Q15389 498 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 DHCR24Q15392 516 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 TMEM196Q5HYL7 178 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 DENND1BQ6P3S1 775 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 DHX40Q8IX18 779 aaKnown RBP25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 P2RY13Q9BPV8 354 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 SLC4A5Q9BY07 1137 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 DCLK3Q9C098 648 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 LHX5Q9H2C1 402 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 ACP6Q9NPH0 428 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 ST7Q9NRC1 585 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 SPATA6Q9NWH7 488 aaPredicted RBP25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 MUC6Q6W4X9 2439 aa25.51■■□□□ 1.67
SDF2L1-201ENST00000248958 YJEFN3A6XGL0 299 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 E7ENQ6 273 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 MDM4O15151 490 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 CAVIN2O95810 425 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 DRD1P21728 446 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 KRT9P35527 623 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 UBXN1Q04323 297 aa25.5■■□□□ 1.67
SDF2L1-201ENST00000248958 MIB1Q86YT6 1006 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms