RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CALN1Q9BXU9 219 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 ADAM7Q9H2U9 754 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 MYZAPP0CAP1 466 aa24.37■■□□□ 1.49
SYNGR3-201ENST00000248121 CSF2RAP15509 400 aa24.37■■□□□ 1.49
SYNGR3-201ENST00000248121 SCNN1AP37088 669 aa24.37■■□□□ 1.49
SYNGR3-201ENST00000248121 CACNA2D1P54289 1103 aa24.37■■□□□ 1.49
SYNGR3-201ENST00000248121 CDH6P55285 790 aa24.37■■□□□ 1.49
SYNGR3-201ENST00000248121 DPYSL3Q14195 570 aa24.37■■□□□ 1.49
SYNGR3-201ENST00000248121 NECAB2Q7Z6G3 386 aa24.37■■□□□ 1.49
SYNGR3-201ENST00000248121 CCDC25Q86WR0 208 aa24.37■■□□□ 1.49
SYNGR3-201ENST00000248121 C10orf88Q9H8K7 445 aa24.37■■□□□ 1.49
SYNGR3-201ENST00000248121 ANAPC5Q9UJX4 755 aa24.37■■□□□ 1.49
SYNGR3-201ENST00000248121 CYP11A1P05108 521 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 PECAM1P16284 738 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 ACADSBP45954 432 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 LHX1P48742 406 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 IZUMO3Q5VZ72 239 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 ZNF771Q7L3S4 317 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 ARCQ7LC44 396 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 RFX6Q8HWS3 928 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 NPAS4Q8IUM7 802 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 NDRG1Q92597 394 aaKnown RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 PCED1BQ96HM7 432 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 DNAI2Q9GZS0 605 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 MCOLN1Q9GZU1 580 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 TMLHEQ9NVH6 421 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 GPATCH2LQ9NWQ4 482 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 TBKBP1A7MCY6 615 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 NT5C1B-RDH14C9J2C7 533 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 RIPK2O43353 540 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 NPR3P17342 541 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 EN2P19622 333 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 IL4RP24394 825 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 PTPN9P43378 593 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 P3H1Q32P28 736 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 ZC3H12AQ5D1E8 599 aaKnown RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 DNAJC21Q5F1R6 531 aaKnown RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 HIBCHQ6NVY1 386 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 SCYL2Q6P3W7 929 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 CLEC20AQ6ZU45 233 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 TMEM173Q86WV6 379 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 CENPIQ92674 756 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 FAM193BQ96PV7 902 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 TMEM106CQ9BVX2 250 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 KANSL3Q9P2N6 904 aa24.36■■□□□ 1.49
SYNGR3-201ENST00000248121 HMGB1P1B2RPK0 211 aaPredicted RBP24.35■■□□□ 1.49
SYNGR3-201ENST00000248121 ATXN1P54253 815 aaKnown RBP24.35■■□□□ 1.49
SYNGR3-201ENST00000248121 CAV1Q03135 178 aa24.35■■□□□ 1.49
SYNGR3-201ENST00000248121 ADCY1Q08828 1119 aa24.35■■□□□ 1.49
SYNGR3-201ENST00000248121 CA9Q16790 459 aa24.35■■□□□ 1.49
SYNGR3-201ENST00000248121 DENND2CQ68D51 928 aa24.35■■□□□ 1.49
SYNGR3-201ENST00000248121 CNKSR3Q6P9H4 555 aa24.35■■□□□ 1.49
SYNGR3-201ENST00000248121 B3GALT6Q96L58 329 aa24.35■■□□□ 1.49
SYNGR3-201ENST00000248121 CDC42EP4Q9H3Q1 356 aaKnown RBP24.35■■□□□ 1.49
SYNGR3-201ENST00000248121 MARCH5Q9NX47 278 aa24.35■■□□□ 1.49
SYNGR3-201ENST00000248121 APOC4-APOC2K7ER74 178 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 NRP1O14786 923 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 APOC2P02655 101 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 SLC11A1P49279 550 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 GDF10P55107 478 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 EIF3BP55884 814 aaKnown RBP24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 PLCB3Q01970 1234 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 ADIGQ0VDE8 80 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 LRRTM3Q86VH5 581 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 TTC13Q8NBP0 860 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 TEKT4Q8WW24 435 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 SNRNP25Q9BV90 132 aaKnown RBP24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 CENPHQ9H3R5 247 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 DNAJC17Q9NVM6 304 aaKnown RBP24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 CALCOCO1Q9P1Z2 691 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 GOLGA6L10A6NI86 522 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 PARNO95453 639 aaKnown RBP24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 ACRP10323 421 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 BOLA3Q53S33 107 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 DDX23Q9BUQ8 820 aaKnown RBP24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 FRMD8P1Q9BZ68 369 aaPredicted RBP24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 KRT82Q9NSB4 513 aa24.34■■□□□ 1.49
SYNGR3-201ENST00000248121 TMEM189-UBE2V1I3L0A0 370 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 TIMP1P01033 207 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 DEFB103AP81534 67 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 KRT71Q3SY84 523 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 OVOS1Q6IE37 1185 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 FAM35AQ86V20 835 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 BBOF1Q8ND07 529 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 UHMK1Q8TAS1 419 aaKnown RBP24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 CCHCR1Q8TD31 782 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 BCL7CQ8WUZ0 217 aaPredicted RBP24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 PKMYT1Q99640 499 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 MED10Q9BTT4 135 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 CDH9Q9ULB4 789 aa24.33■■□□□ 1.49
SYNGR3-201ENST00000248121 SGK1O00141 431 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 DNALI1O14645 258 aaPredicted RBP24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 OR4Q2P0C623 313 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 NDUFV1P49821 464 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 SKOR1P84550 965 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 IFFO1Q0D2I5 559 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 EMC10Q5UCC4 262 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 NPNTQ6UXI9 565 aa24.33■■□□□ 1.48
SYNGR3-201ENST00000248121 KCTD13Q8WZ19 329 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms