RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 MTCL1Q9Y4B5 1905 aaKnown RBP20.06■□□□□ 0.8
SBDS-201ENST00000246868 NCK2O43639 380 aa20.06■□□□□ 0.8
SBDS-201ENST00000246868 CLASP2O75122 1294 aaKnown RBP20.06■□□□□ 0.8
SBDS-201ENST00000246868 ATP11AP98196 1134 aa20.06■□□□□ 0.8
SBDS-201ENST00000246868 TAF10Q12962 218 aa20.06■□□□□ 0.8
SBDS-201ENST00000246868 SLC25A52Q3SY17 297 aa20.06■□□□□ 0.8
SBDS-201ENST00000246868 TRNP1Q6NT89 227 aa20.06■□□□□ 0.8
SBDS-201ENST00000246868 CC2D1AQ6P1N0 951 aaPredicted RBP20.06■□□□□ 0.8
SBDS-201ENST00000246868 PDZD8Q8NEN9 1154 aa20.06■□□□□ 0.8
SBDS-201ENST00000246868 TLR10Q9BXR5 811 aa20.06■□□□□ 0.8
SBDS-201ENST00000246868 GMIPQ9P107 970 aa20.06■□□□□ 0.8
SBDS-201ENST00000246868 PACSIN2Q9UNF0 486 aaPredicted RBP20.06■□□□□ 0.8
SBDS-201ENST00000246868 CCDC66A2RUB6 948 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 DNA2P51530 1060 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 HADHQ16836 314 aaKnown RBP20.05■□□□□ 0.8
SBDS-201ENST00000246868 CDO1Q16878 200 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 PPM1LQ5SGD2 360 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 RNF139Q8WU17 664 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 FAM172AQ8WUF8 416 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 OVCA2Q8WZ82 227 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 EDEM1Q92611 657 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 TRMT2BQ96GJ1 504 aaKnown RBP20.05■□□□□ 0.8
SBDS-201ENST00000246868 HES6Q96HZ4 224 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 TLE6Q9H808 572 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 RRAGDQ9NQL2 400 aaPredicted RBP20.05■□□□□ 0.8
SBDS-201ENST00000246868 NAALADL1Q9UQQ1 740 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 A0A1W2PQH9 124 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 EPOPA6NHQ4 379 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 FANCGO15287 622 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 RALAP11233 206 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 PCK1P35558 622 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 SULT1E1P49888 294 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 C15orf59Q2T9L4 293 aaPredicted RBP20.05■□□□□ 0.8
SBDS-201ENST00000246868 LRIT3Q3SXY7 679 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 PAPD7Q5XG87 772 aaKnown RBP20.05■□□□□ 0.8
SBDS-201ENST00000246868 RSRC2Q7L4I2 434 aaKnown RBP20.05■□□□□ 0.8
SBDS-201ENST00000246868 RHOT1Q8IXI2 618 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 HDAC7Q8WUI4 952 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 PSMG2Q969U7 264 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 MRPL38Q96DV4 380 aaKnown RBP20.05■□□□□ 0.8
SBDS-201ENST00000246868 MYRFLQ96LU7 910 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 ZNF512Q96ME7 567 aaPredicted RBP20.05■□□□□ 0.8
SBDS-201ENST00000246868 MAN1C1Q9NR34 630 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 CLIC5Q9NZA1 410 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 SAR1BQ9Y6B6 198 aa20.05■□□□□ 0.8
SBDS-201ENST00000246868 SPDYE4A6NLX3 237 aa20.04■□□□□ 0.8
SBDS-201ENST00000246868 PSTPIP1O43586 416 aa20.04■□□□□ 0.8
SBDS-201ENST00000246868 LRCH4O75427 683 aa20.04■□□□□ 0.8
SBDS-201ENST00000246868 URI1O94763 535 aaPredicted RBP20.04■□□□□ 0.8
SBDS-201ENST00000246868 FYNP06241 537 aa20.04■□□□□ 0.8
SBDS-201ENST00000246868 TCP1P17987 556 aaKnown RBP20.04■□□□□ 0.8
SBDS-201ENST00000246868 CTNNA1P35221 906 aaKnown RBP20.04■□□□□ 0.8
SBDS-201ENST00000246868 SYPL2Q5VXT5 272 aa20.04■□□□□ 0.8
SBDS-201ENST00000246868 STRADAQ7RTN6 431 aa20.04■□□□□ 0.8
SBDS-201ENST00000246868 DNAJB7Q7Z6W7 309 aaPredicted RBP20.04■□□□□ 0.8
SBDS-201ENST00000246868 SCD5Q86SK9 330 aa20.04■□□□□ 0.8
SBDS-201ENST00000246868 RBM23Q86U06 439 aaKnown RBP20.04■□□□□ 0.8
SBDS-201ENST00000246868 CD101Q93033 1021 aa20.04■□□□□ 0.8
SBDS-201ENST00000246868 SNX12Q9UMY4 172 aa20.04■□□□□ 0.8
SBDS-201ENST00000246868 PER2O15055 1255 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 PRPSAP2O60256 369 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 HMGA1P17096 107 aaKnown RBP20.03■□□□□ 0.8
SBDS-201ENST00000246868 CTNNA2P26232 953 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 PPP3CCP48454 512 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 DAB2IPQ5VWQ8 1189 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 CPNE8Q86YQ8 564 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 SLC22A17Q8WUG5 538 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 CENPIQ92674 756 aaPredicted RBP20.03■□□□□ 0.8
SBDS-201ENST00000246868 NT5C3BQ969T7 300 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 CDK5RAP1Q96SZ6 601 aaKnown RBP20.03■□□□□ 0.8
SBDS-201ENST00000246868 TBCBQ99426 244 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 NPY6RQ99463 290 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 CDCA3Q99618 268 aaPredicted RBP20.03■□□□□ 0.8
SBDS-201ENST00000246868 ZNF576Q9H609 170 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 FAM204AQ9H8W3 233 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 NMUR1Q9HB89 426 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 TRPM5Q9NZQ8 1165 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 PCDHA3Q9Y5H8 950 aa20.03■□□□□ 0.8
SBDS-201ENST00000246868 TRANK1O15050 2925 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 M0QYT0 321 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 KCNK3O14649 394 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 F9P00740 461 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 KRT7P08729 469 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 EPCAMP16422 314 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 PRLRP16471 622 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 MIPP30301 263 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 GBP1P32455 592 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 TUBB2AQ13885 445 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 ODF2Q5BJF6 829 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 ZFYVE27Q5T4F4 411 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 LRRC38Q5VT99 294 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 SND1Q7KZF4 910 aaKnown RBP eCLIP20.02■□□□□ 0.8
SBDS-201ENST00000246868 POLNQ7Z5Q5 900 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 TADA2BQ86TJ2 420 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 TUBB2BQ9BVA1 445 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 OLA1Q9NTK5 396 aaKnown RBP20.02■□□□□ 0.8
SBDS-201ENST00000246868 TMEM51Q9NW97 253 aa20.02■□□□□ 0.8
SBDS-201ENST00000246868 COL4A4P53420 1690 aaPredicted RBP20.02■□□□□ 0.8
SBDS-201ENST00000246868 RFXAPO00287 272 aa20.02■□□□□ 0.79
SBDS-201ENST00000246868 ZMYND10O75800 440 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms