RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 RDXP35241 583 aaKnown RBP19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 HFE2Q6ZVN8 426 aa19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 ZDHHC14Q8IZN3 488 aa19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 GRK7Q8WTQ7 553 aa19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 AAASQ9NRG9 546 aa19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 CHST7Q9NS84 486 aa19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 SPG21Q9NZD8 308 aa19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 NAALADL1Q9UQQ1 740 aa19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 USP3Q9Y6I4 520 aa19.53■□□□□ 0.72
TNFSF9-201ENST00000245817 C3orf70A6NLC5 250 aaPredicted RBP19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 TFE3P19532 575 aaPredicted RBP19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 DEUP1Q05D60 604 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 SNX1Q13596 522 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 PSMD5Q16401 504 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 CCNG2Q16589 344 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 RAB6CQ53S08 254 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 PRSS55Q6UWB4 352 aaPredicted RBP19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 ZNF365Q70YC5 407 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 RFX6Q8HWS3 928 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 NUP93Q8N1F7 819 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 COLGALT1Q8NBJ5 622 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 TTC13Q8NBP0 860 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 ATAD1Q8NBU5 361 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 FBXO22Q8NEZ5 403 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 SLC7A14Q8TBB6 771 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 IFT81Q8WYA0 676 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 NPY6RQ99463 290 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 LBHD1Q9BQE6 289 aaPredicted RBP19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 ZBED2Q9BTP6 218 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 SNRNP25Q9BV90 132 aaKnown RBP19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 DCLK3Q9C098 648 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 RAB6CQ9H0N0 254 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 FBXO44Q9H4M3 255 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 GDF3Q9NR23 364 aa19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 MRPL42Q9Y6G3 142 aaKnown RBP19.52■□□□□ 0.72
TNFSF9-201ENST00000245817 SYNJ2BP-COX16A0A087WUM0 186 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 TBC1D4O60343 1298 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 ECEL1O95672 775 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 SOD2P04179 222 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 NME3Q13232 169 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 DDR2Q16832 855 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 MGAT5BQ3V5L5 792 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 SYPL2Q5VXT5 272 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 BSPRYQ5W0U4 402 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 SND1Q7KZF4 910 aaKnown RBP eCLIP19.52■□□□□ 0.716e-7■■■□□ 18.9
TNFSF9-201ENST00000245817 ANKS1BQ7Z6G8 1248 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 MTERF4Q7Z6M4 381 aaKnown RBP19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 SLC39A11Q8N1S5 342 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 SCAMP5Q8TAC9 235 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 PIK3R5Q8WYR1 880 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 NT5C3BQ969T7 300 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 HERPUD2Q9BSE4 406 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 RC3H2Q9HBD1 1191 aaKnown RBP19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 COX16Q9P0S2 106 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 BACE2Q9Y5Z0 518 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 CDY1Q9Y6F8 540 aa19.52■□□□□ 0.71
TNFSF9-201ENST00000245817 MTMR11A4FU01 709 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 F9P00740 461 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 TNFRSF8P28908 595 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 PPM1AP35813 382 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 LMNB2Q03252 620 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 TFDP2Q14188 446 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 BTBD8Q5XKL5 378 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 PSRC1Q6PGN9 363 aaPredicted RBP19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 RNF19BQ6ZMZ0 732 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 JAMLQ86YT9 394 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 ATL2Q8NHH9 583 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 ATG4AQ8WYN0 398 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 CCDC114Q96M63 670 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 SEPT5Q99719 369 aaPredicted RBP19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 ABCC13Q9NSE7 274 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 MTRRQ9UBK8 725 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 PCDHB12Q9Y5F1 795 aa19.51■□□□□ 0.71
TNFSF9-201ENST00000245817 C2CD2LO14523 706 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 TNFRSF10BO14763 440 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 CST8O60676 142 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 ENDOD1O94919 500 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 CD48P09326 243 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 GBP1P32455 592 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 ATXN1P54253 815 aaKnown RBP19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 YWHAGP61981 247 aaKnown RBP eCLIP19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 RPL10AP62906 217 aaKnown RBP19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 DYNLT1P63172 113 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 CUL1Q13616 776 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 PPP1R7Q15435 360 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 TTC27Q6P3X3 843 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 CYP4V2Q6ZWL3 525 aaPredicted RBP19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 FAM131BQ86XD5 332 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 ARHGAP18Q8N392 663 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 EDEM1Q92611 657 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 FRMD8P1Q9BZ68 369 aaPredicted RBP19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 DHX35Q9H5Z1 703 aaKnown RBP19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 FAM204AQ9H8W3 233 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 FAM114A2Q9NRY5 505 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 GPATCH2LQ9NWQ4 482 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 AP4E1Q9UPM8 1137 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 CEP290O15078 2479 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 LTBP2Q14767 1821 aa19.5■□□□□ 0.71
TNFSF9-201ENST00000245817 ESYT3A0FGR9 886 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms