RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 KCNH6Q9H252 994 aa11.16□□□□□ -0.62
PFDN5-201ENST00000243040 LHX5Q9H2C1 402 aa11.16□□□□□ -0.62
PFDN5-201ENST00000243040 LTB4R2Q9NPC1 389 aa11.16□□□□□ -0.62
PFDN5-201ENST00000243040 RTN4Q9NQC3 1192 aaKnown RBP11.16□□□□□ -0.62
PFDN5-201ENST00000243040 FAM207AQ9NSI2 230 aaPredicted RBP11.16□□□□□ -0.62
PFDN5-201ENST00000243040 DUS2Q9NX74 493 aaKnown RBP11.16□□□□□ -0.62
PFDN5-201ENST00000243040 SMPD4Q9NXE4 827 aa11.16□□□□□ -0.62
PFDN5-201ENST00000243040 GTSE1Q9NYZ3 720 aa11.16□□□□□ -0.62
PFDN5-201ENST00000243040 DNMT3LQ9UJW3 386 aa11.16□□□□□ -0.62
PFDN5-201ENST00000243040 MYOFQ9NZM1 2061 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 SPECC1L-ADORA2AF8WAN1 911 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 SLC9A3R1O14745 358 aaPredicted RBP11.15□□□□□ -0.62
PFDN5-201ENST00000243040 TBX18O95935 607 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 CYP11B1P15538 503 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 TARSP26639 723 aaKnown RBP11.15□□□□□ -0.62
PFDN5-201ENST00000243040 CDH5P33151 784 aaPredicted RBP11.15□□□□□ -0.62
PFDN5-201ENST00000243040 MAGEA9P43362 315 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 RGS7P49802 495 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
PFDN5-201ENST00000243040 TPM4P67936 248 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 GOLGA8FQ08AF8 430 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 GOLGA8DPQ0D2H9 430 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 PDCLQ13371 301 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 FILIP1LQ4L180 1135 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 ZNF852Q6ZMS4 543 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 TMEM110Q86TL2 294 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 LUZP1Q86V48 1076 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 ZNF677Q86XU0 584 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 CCDC105Q8IYK2 499 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 ZNF687Q8N1G0 1237 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 CPA6Q8N4T0 437 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 NEK11Q8NG66 645 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 EPS8L1Q8TE68 723 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 OTUB2Q96DC9 234 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 NELL2Q99435 816 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 FOXQ1Q9C009 403 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 NACA2Q9H009 215 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 EBF3Q9H4W6 596 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 ABCC13Q9NSE7 274 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 OLA1Q9NTK5 396 aaKnown RBP11.15□□□□□ -0.62
PFDN5-201ENST00000243040 DLGAP2Q9P1A6 1054 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 CFAP97Q9P2B7 532 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 TBC1D14Q9P2M4 693 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 CYTH4Q9UIA0 394 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 MRPS17Q9Y2R5 130 aaKnown RBP11.15□□□□□ -0.62
PFDN5-201ENST00000243040 WNT6Q9Y6F9 365 aa11.15□□□□□ -0.62
PFDN5-201ENST00000243040 WDFY4Q6ZS81 3184 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 A0A1W2PQC6 194 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 OTOL1A6NHN0 477 aaPredicted RBP11.14□□□□□ -0.63
PFDN5-201ENST00000243040 YJEFN3A6XGL0 299 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 E5RJQ4 531 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 E7ENQ6 273 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 MDM4O15151 490 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 TEX33O43247 280 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 SART1O43290 800 aaKnown RBP11.14□□□□□ -0.63
PFDN5-201ENST00000243040 GREM1O60565 184 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 NFATC1O95644 943 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 LCP1P13796 627 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 ARSAP15289 507 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 SOX5P35711 763 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 SOX9P48436 509 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 KPNA1P52294 538 aaPredicted RBP11.14□□□□□ -0.63
PFDN5-201ENST00000243040 C10orf120Q5SQS8 335 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 BSPRYQ5W0U4 402 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 BTBD8Q5XKL5 378 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 MSANTD2Q6P1R3 559 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 LRSAM1Q6UWE0 723 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 BEND5Q7L4P6 421 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 WDTC1Q8N5D0 677 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 DDX1Q92499 740 aaKnown RBP11.14□□□□□ -0.63
PFDN5-201ENST00000243040 FAM3CQ92520 227 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 CHFRQ96EP1 664 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 SPAG5Q96R06 1193 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 PRRX2Q99811 253 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 ECT2Q9H8V3 914 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 NLRC4Q9NPP4 1024 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 SH3BP1Q9Y3L3 701 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 SIT1Q9Y3P8 196 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 HCN4Q9Y3Q4 1203 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 ARIH1Q9Y4X5 557 aaPredicted RBP11.14□□□□□ -0.63
PFDN5-201ENST00000243040 CEP83Q9Y592 693 aa11.14□□□□□ -0.63
PFDN5-201ENST00000243040 GOLGA6L19H0YKK7 550 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 STK25O00506 426 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 NCAM2O15394 837 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 PAPSS1O43252 624 aaPredicted RBP11.13□□□□□ -0.63
PFDN5-201ENST00000243040 PI15O43692 258 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 STC2O76061 302 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 LSM8O95777 96 aaKnown RBP11.13□□□□□ -0.63
PFDN5-201ENST00000243040 LTFP02788 710 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 IRF1P10914 325 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 COL9A1P20849 921 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 CD72P21854 359 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 GJA4P35212 333 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 KRT9P35527 623 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 STAT1P42224 750 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 RPS9P46781 194 aaKnown RBP11.13□□□□□ -0.63
PFDN5-201ENST00000243040 COG7P83436 770 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 AMPD2Q01433 879 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 FZD5Q13467 585 aa11.13□□□□□ -0.63
PFDN5-201ENST00000243040 UBXN2BQ14CS0 331 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms