RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 KIF3AQ9Y496 699 aa8.88□□□□□ -0.99
IFT43-201ENST00000238628 PCDHGB2Q9Y5G2 931 aa8.88□□□□□ -0.99
IFT43-201ENST00000238628 ATMQ13315 3056 aa8.88□□□□□ -0.99
IFT43-201ENST00000238628 IGHV1OR15-9A0A0B4J2B8 117 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 A0A1B0GTW7 788 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 H3BQV1 296 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 ZBTB24O43167 697 aaPredicted RBP8.87□□□□□ -0.99
IFT43-201ENST00000238628 BRINP1O60477 761 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 ATP2C2O75185 946 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 CR2P20023 1033 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 BDNFP23560 247 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 LMO2P25791 158 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 EIF2DP41214 584 aaKnown RBP8.87□□□□□ -0.99
IFT43-201ENST00000238628 GRIA2P42262 883 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 TNFRSF4P43489 277 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 KIR2DL1P43626 348 aaPredicted RBP8.87□□□□□ -0.99
IFT43-201ENST00000238628 PPP3CCP48454 512 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 WNT7BP56706 349 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 USP46P62068 366 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 SLC7A9P82251 487 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 CYP27A1Q02318 531 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 RESTQ13127 1097 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 CCDC142Q17RM4 750 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 SOWAHAQ2M3V2 549 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 HLA-BQ31612 363 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 RHBDF2Q6PJF5 856 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 IL27RAQ6UWB1 636 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 VSTM1Q6UX27 236 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 DPH6Q7L8W6 267 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 DYMQ7RTS9 669 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 SFR1Q86XK3 245 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 SFTPA1Q8IWL2 248 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 BRSK2Q8IWQ3 736 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 KIAA1958Q8N8K9 716 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 ZSWIM2Q8NEG5 633 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 NOC3LQ8WTT2 800 aaKnown RBP8.87□□□□□ -0.99
IFT43-201ENST00000238628 LARP4BQ92615 738 aaKnown RBP8.87□□□□□ -0.99
IFT43-201ENST00000238628 FOXJ1Q92949 421 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 HVCN1Q96D96 273 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 SAAL1Q96ER3 474 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 ZNF419Q96HQ0 510 aaPredicted RBP8.87□□□□□ -0.99
IFT43-201ENST00000238628 CEP295NLQ96MC4 621 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 SYT15Q9BQS2 421 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 MIR1-1HGQ9H1L0 117 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 ZDHHC4Q9NPG8 344 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 ARHGEF4Q9NR80 690 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 SMPD4Q9NXE4 827 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 EHD2Q9NZN4 543 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 CALCOCO1Q9P1Z2 691 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 ITGA11Q9UKX5 1188 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 CDH9Q9ULB4 789 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 CYP8B1Q9UNU6 501 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 CPQQ9Y646 472 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 KNL1Q8NG31 2342 aa8.87□□□□□ -0.99
IFT43-201ENST00000238628 GOLGA8IPA6NC78 632 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 TBC1D3BA6NDS4 549 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 ZNF840PA6NDX5 716 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 GOLGA8JA6NMD2 632 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.86□□□□□ -0.99
IFT43-201ENST00000238628 SCAMP3O14828 347 aaKnown RBP8.86□□□□□ -0.99
IFT43-201ENST00000238628 TRIM66O15016 1216 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 ADAM23O75077 832 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 ZNF217O75362 1048 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 ADH1CP00326 375 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 AFPP02771 609 aaKnown RBP8.86□□□□□ -0.99
IFT43-201ENST00000238628 PDGFRBP09619 1106 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 TMEM191BP0C7N4 346 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 MBL2P11226 248 aaPredicted RBP8.86□□□□□ -0.99
IFT43-201ENST00000238628 GABRG2P18507 467 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 LONP1P36776 959 aaKnown RBP8.86□□□□□ -0.99
IFT43-201ENST00000238628 PSMC1P62191 440 aaKnown RBP8.86□□□□□ -0.99
IFT43-201ENST00000238628 GAD2Q05329 585 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 KDSRQ06136 332 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 VAC14Q08AM6 782 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 KCNA1Q09470 495 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 MESP2Q0VG99 397 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 MAPRE1Q15691 268 aaKnown RBP8.86□□□□□ -0.99
IFT43-201ENST00000238628 TBC1D25Q3MII6 688 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 NUDT18Q6ZVK8 323 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 C12orf40Q86WS4 652 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 ERICH1Q86X53 443 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 SYCP3Q8IZU3 236 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 ZCCHC9Q8N567 271 aaKnown RBP8.86□□□□□ -0.99
IFT43-201ENST00000238628 NAT16Q8N8M0 369 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 ZNF248Q8NDW4 579 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 CXorf38Q8TB03 319 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 MYLPFQ96A32 169 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 ACCSQ96QU6 501 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 PCIF1Q9H4Z3 704 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 MRPL44Q9H9J2 332 aaKnown RBP8.86□□□□□ -0.99
IFT43-201ENST00000238628 CRTAC1Q9NQ79 661 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 RBAKQ9NYW8 714 aaPredicted RBP8.86□□□□□ -0.99
IFT43-201ENST00000238628 TBC1D7Q9P0N9 293 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 GMIPQ9P107 970 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 CFAP97Q9P2B7 532 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 TBC1D14Q9P2M4 693 aa8.86□□□□□ -0.99
IFT43-201ENST00000238628 MEI4A8MW99 385 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 PPP1R37O75864 691 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 OLFM2O95897 454 aa8.85□□□□□ -0.99
IFT43-201ENST00000238628 ADH5P11766 374 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms