RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SPATA4Q8NEY3 305 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 ICE1Q9Y2F5 2266 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 EGFRP00533 1210 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 CTXN3Q4LDR2 81 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 RSPH1Q8WYR4 309 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 PHF21BQ96EK2 531 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 IGSF9BQ9UPX0 1349 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 DYTNA2CJ06 578 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 JAK1P23458 1154 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 KLK7P49862 253 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 ZNF862O60290 1169 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 CCNT2O60583 730 aaKnown RBP13.6□□□□□ -0.23
NEK9-201ENST00000238616 SLC2A3P11169 496 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 SCRN3Q0VDG4 424 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 TSPAN14Q8NG11 270 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 CELF4Q9BZC1 486 aaKnown RBP13.6□□□□□ -0.23
NEK9-201ENST00000238616 ALKBH4Q9NXW9 302 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 WDR35Q9P2L0 1181 aa13.6□□□□□ -0.23
NEK9-201ENST00000238616 BAIAP3O94812 1187 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 SNRPAP09012 282 aaKnown RBP13.59□□□□□ -0.23
NEK9-201ENST00000238616 GRIK3Q13003 919 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 ADGRF2Q8IZF7 708 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 KCTD14Q9BQ13 255 aaPredicted RBP13.59□□□□□ -0.23
NEK9-201ENST00000238616 IARS2Q9NSE4 1012 aaKnown RBP13.59□□□□□ -0.23
NEK9-201ENST00000238616 ZNRF3Q9ULT6 936 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 PRKAB1Q9Y478 270 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 ASCC3Q8N3C0 2202 aaKnown RBP13.59□□□□□ -0.23
NEK9-201ENST00000238616 OPLAHO14841 1288 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 DSG1Q02413 1049 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 SETMARQ53H47 684 aaPredicted RBP13.59□□□□□ -0.23
NEK9-201ENST00000238616 GPR141Q7Z602 305 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 PRRG4Q9BZD6 226 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 CYLDQ9NQC7 956 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 GPRC5DQ9NZD1 345 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 NARFQ9UHQ1 456 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 FAM220BPB1ANY3 271 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 TRIM24O15164 1050 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 IDH3BO43837 385 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 GRIN3BO60391 1043 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 CHRNB3Q05901 458 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 COLGALT2Q8IYK4 626 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 FAM153AQ9UHL3 310 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 USP15Q9Y4E8 981 aaPredicted RBP13.59□□□□□ -0.23
NEK9-201ENST00000238616 SCGNO76038 276 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 KCNJ1P48048 391 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 IL2P60568 153 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
NEK9-201ENST00000238616 GFM2Q969S9 779 aaKnown RBP13.59□□□□□ -0.23
NEK9-201ENST00000238616 TMEM39AQ9NV64 488 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 EXTL3O43909 919 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 POMCP01189 267 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 MYL12AP19105 171 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 COPAP53621 1224 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 PLEKHA7Q6IQ23 1121 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 NEK7Q8TDX7 302 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 ELOVL6Q9H5J4 265 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 RP1P56715 2156 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 SAC3D1A6NKF1 404 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 TAF6P49848 677 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 SCAIQ8N9R8 606 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 SNRNP27Q8WVK2 155 aaKnown RBP13.59□□□□□ -0.23
NEK9-201ENST00000238616 FIG4Q92562 907 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 STAP2Q9UGK3 403 aa13.59□□□□□ -0.23
NEK9-201ENST00000238616 SLC25A12O75746 678 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 SNAP47Q5SQN1 464 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 SLFN11Q7Z7L1 901 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 PMM1Q92871 262 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 CHP1Q99653 195 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 PRRG3Q9BZD7 231 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 RPS6KA4O75676 772 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 HLA-DRAP01903 254 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 THP07101 528 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 POU6F1Q14863 301 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 MDM1Q8TC05 714 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 STARD7Q9NQZ5 370 aa13.58□□□□□ -0.23
NEK9-201ENST00000238616 AAR2Q9Y312 384 aaKnown RBP13.58□□□□□ -0.23
NEK9-201ENST00000238616 CNTNAP2Q9UHC6 1331 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 ITGA8P53708 1063 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 NR6A1Q15406 480 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 STRA8Q7Z7C7 330 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 CLASP1Q7Z460 1538 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 TCEA3O75764 348 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 IFNA16P05015 189 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 RHOCP08134 193 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 OTUD4Q01804 1114 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 XRCC4Q13426 336 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 RPTNQ6XPR3 784 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 PEG10Q86TG7 708 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 LPAR1Q92633 364 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 MTO1Q9Y2Z2 717 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 STILQ15468 1287 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 ESRP1Q6NXG1 681 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 ULK3Q6PHR2 472 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 FAM228AQ86W67 206 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 SEPT1Q8WYJ6 367 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 PPP1R10Q96QC0 940 aaKnown RBP13.58□□□□□ -0.24
NEK9-201ENST00000238616 PCDHB9Q9Y5E1 797 aa13.58□□□□□ -0.24
NEK9-201ENST00000238616 CENPXA8MT69 81 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms