RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 RNF38Q9H0F5 515 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 POMKQ9H5K3 350 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 TASP1Q9H6P5 420 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 ABCC13Q9NSE7 274 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 CLIC5Q9NZA1 410 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.66□□□□□ -0.7
HMGCL-201ENST00000235958 NUDT5Q9UKK9 219 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 STRIP2Q9ULQ0 834 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 PCDHA13Q9Y5I0 950 aa10.66□□□□□ -0.7
HMGCL-201ENST00000235958 CLUHO75153 1309 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 TCRBV5S1A1TA0A578 114 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 ANKRD62A6NC57 917 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 C2orf78A6NCI8 922 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 GJB6O95452 261 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 MYBL1P10243 752 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 RALAP11233 206 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 KRT3P12035 628 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 CEBPBP17676 345 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 CYP4F8P98187 520 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 MAMLD1Q13495 774 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 ARHGAP15Q53QZ3 475 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 STXBP5Q5T5C0 1151 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 FAM102AQ5T9C2 384 aaPredicted RBP10.65□□□□□ -0.7
HMGCL-201ENST00000235958 SYPL2Q5VXT5 272 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 PLEKHA7Q6IQ23 1121 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 PTCRAQ6ISU1 281 aaPredicted RBP10.65□□□□□ -0.7
HMGCL-201ENST00000235958 TOGARAM2Q6ZUX3 1019 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 SLC26A9Q7LBE3 791 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 ARL14EPQ8N8R7 260 aaPredicted RBP10.65□□□□□ -0.7
HMGCL-201ENST00000235958 C3orf20Q8ND61 904 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 CCDC112Q8NEF3 446 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 GOLGA1Q92805 767 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 FGF13Q92913 245 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 GCNAQ96QF7 691 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 SLC22A12Q96S37 553 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 THAP2Q9H0W7 228 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 CCSER2Q9H7U1 834 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 POPDC2Q9HBU9 364 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 PARVAQ9NVD7 372 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.65□□□□□ -0.7
HMGCL-201ENST00000235958 ASNSD1Q9NWL6 643 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 MYO1AQ9UBC5 1043 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 CNOT8Q9UFF9 292 aaKnown RBP10.65□□□□□ -0.7
HMGCL-201ENST00000235958 TMEM59LQ9UK28 342 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 NAALADL1Q9UQQ1 740 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 COL6A3P12111 3177 aa10.65□□□□□ -0.7
HMGCL-201ENST00000235958 OBSL1O75147 1896 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 SOBPA7XYQ1 873 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 CAPN9O14815 690 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 ARHGAP6O43182 974 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 ATMINO43313 823 aaPredicted RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 COCHO43405 550 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 TLR5O60602 858 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 HSF2BPO75031 334 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 OAS1P00973 400 aaKnown RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 CYP1A2P05177 515 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 NCAM1P13591 858 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 DDX6P26196 483 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 RFC1P35251 1148 aaPredicted RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 ATP5C1P36542 298 aaKnown RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 SCNN1AP37088 669 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 GSCP56915 257 aaPredicted RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 RPL7AP62424 266 aaKnown RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 CCZ1BP86790 482 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 CCZ1P86791 482 aaPredicted RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 SMAD2Q15796 467 aaKnown RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 PUS10Q3MIT2 529 aaKnown RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 DCAF6Q58WW2 860 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 C10orf120Q5SQS8 335 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 PPP1R15BQ5SWA1 713 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 DNAJC24Q6P3W2 148 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 RSRC2Q7L4I2 434 aaKnown RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 BEND5Q7L4P6 421 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 GET4Q7L5D6 327 aaPredicted RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 ARCQ7LC44 396 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 NPAS3Q8IXF0 933 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 CMTM8Q8IZV2 173 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 DEFB106AQ8N104 65 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 RNF139Q8WU17 664 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 ZNF653Q96CK0 615 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 TRIM11Q96F44 468 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 MYADMQ96S97 322 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 DDX23Q9BUQ8 820 aaKnown RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 SELENOOQ9BVL4 669 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 SLITRK6Q9H5Y7 841 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 TRPC7Q9HCX4 862 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 GDE1Q9NZC3 331 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 DNMT3LQ9UJW3 386 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 CDH7Q9ULB5 785 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 INTUQ9ULD6 942 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 REXO2Q9Y3B8 237 aaKnown RBP10.64□□□□□ -0.71
HMGCL-201ENST00000235958 MYO16Q9Y6X6 1858 aa10.64□□□□□ -0.71
HMGCL-201ENST00000235958 TRAV19A0A0A6YYK7 116 aa10.63□□□□□ -0.71
HMGCL-201ENST00000235958 C2CD4BA6NLJ0 364 aa10.63□□□□□ -0.71
HMGCL-201ENST00000235958 MDM4O15151 490 aa10.63□□□□□ -0.71
HMGCL-201ENST00000235958 NRDCO43847 1150 aa10.63□□□□□ -0.71
HMGCL-201ENST00000235958 IPO7O95373 1038 aaKnown RBP10.63□□□□□ -0.71
HMGCL-201ENST00000235958 TMEM253P0C7T8 217 aa10.63□□□□□ -0.71
HMGCL-201ENST00000235958 LAMP2P13473 410 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms