RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 R3HDM1Q15032 1099 aaKnown RBP11.9□□□□□ -0.5
LAMA4-201ENST00000230538 SLC47A2Q86VL8 602 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 ZNF614Q8N883 585 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 CAMKK2Q96RR4 588 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 TMEM121Q9BTD3 319 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 UBXN6Q9BZV1 441 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 GPRC5DQ9NZD1 345 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 TSC22D4Q9Y3Q8 395 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 PPRC1Q5VV67 1664 aaKnown RBP11.9□□□□□ -0.5
LAMA4-201ENST00000230538 MGAT4DA6NG13 374 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 NBNO60934 754 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 FBXO21O94952 628 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 ITGALP20701 1170 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 EFEMP1Q12805 493 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 PDIA6Q15084 440 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 ATP6AP1LQ52LC2 224 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 FAM9CQ8IZT9 166 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 DMAP1Q9NPF5 467 aaPredicted RBP11.9□□□□□ -0.5
LAMA4-201ENST00000230538 FBXO28Q9NVF7 368 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 DSEQ9UL01 958 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 GRIN3BO60391 1043 aa11.9□□□□□ -0.51
LAMA4-201ENST00000230538 ATP6V1B2P21281 511 aa11.9□□□□□ -0.51
LAMA4-201ENST00000230538 SCTRP47872 440 aa11.9□□□□□ -0.51
LAMA4-201ENST00000230538 AQP5P55064 265 aa11.9□□□□□ -0.51
LAMA4-201ENST00000230538 AGBL3Q8NEM8 1001 aa11.9□□□□□ -0.51
LAMA4-201ENST00000230538 PPP1R10Q96QC0 940 aaKnown RBP11.9□□□□□ -0.51
LAMA4-201ENST00000230538 CBWD1Q9BRT8 395 aa11.9□□□□□ -0.51
LAMA4-201ENST00000230538 FUT8Q9BYC5 575 aa11.9□□□□□ -0.51
LAMA4-201ENST00000230538 GLP2RO95838 553 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 RHOCP08134 193 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 ARP10275 920 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 PEX5P50542 639 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 CTXN3Q4LDR2 81 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 HERC6Q8IVU3 1022 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 TMEM120AQ9BXJ8 343 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 KANSL1LA0AUZ9 987 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 ZNF682O95780 498 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 TRIM16LQ309B1 348 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 PDPK2PQ6A1A2 396 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 SH3GL2Q99962 352 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 RERGLQ9H628 205 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 C10orf88Q9H8K7 445 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 TAGLN3Q9UI15 199 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.89□□□□□ -0.51
LAMA4-201ENST00000230538 GNG14A0A1W2PPG7 69 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 RNASEH1O60930 286 aaKnown RBP11.89□□□□□ -0.51
LAMA4-201ENST00000230538 RBP1P09455 135 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 GRK3P35626 688 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 CAP2P40123 477 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 SFSWAPQ12872 951 aaKnown RBP11.89□□□□□ -0.51
LAMA4-201ENST00000230538 ITPK1Q13572 414 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 WDR49Q8IV35 697 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 ACTRT1Q8TDG2 376 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 SLC20A1Q8WUM9 679 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 TMEM176AQ96HP8 235 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 APOL2Q9BQE5 337 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 ADGRE3Q9BY15 652 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 PADI4Q9UM07 663 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 RARGP13631 454 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 DPEP1P16444 411 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 CALB2P22676 271 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 TRIM71Q2Q1W2 868 aaKnown RBP11.89□□□□□ -0.51
LAMA4-201ENST00000230538 ZCWPW2Q504Y3 356 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 MOXD1Q6UVY6 613 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 ZNF438Q7Z4V0 828 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 B3GALNT2Q8NCR0 500 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 MYCBPAPQ8TBZ2 947 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 CDC42EP4Q9H3Q1 356 aaKnown RBP11.89□□□□□ -0.51
LAMA4-201ENST00000230538 NT5MQ9NPB1 228 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 OSGEPQ9NPF4 335 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 CYP39A1Q9NYL5 469 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 VPS28Q9UK41 221 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 RAD54BQ9Y620 910 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 SLC12A8A0AV02 714 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 SLCO1B7G3V0H7 640 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 DYRK3O43781 588 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 POU1F1P28069 291 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 RHOAP61586 193 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 USP39Q53GS9 565 aaKnown RBP11.89□□□□□ -0.51
LAMA4-201ENST00000230538 DDHD1Q8NEL9 900 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 ANKRD49Q8WVL7 239 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 NAT9Q9BTE0 207 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 NFKBIL1Q9UBC1 381 aaPredicted RBP11.89□□□□□ -0.51
LAMA4-201ENST00000230538 JCADQ9P266 1359 aa11.89□□□□□ -0.51
LAMA4-201ENST00000230538 SREBF1P36956 1147 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 LHX1P48742 406 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 NUP107P57740 925 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 RPL10AP62906 217 aaKnown RBP11.88□□□□□ -0.51
LAMA4-201ENST00000230538 CYP24A1Q07973 514 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 CSHL1Q14406 222 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 Q4G0T1 1027 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 HASPINQ8TF76 798 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 GPAMQ9HCL2 828 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 IL1RAPL1Q9NZN1 696 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 SPATA31A1Q5TZJ5 1347 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 PPP4CP60510 307 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 ITGA9Q13797 1035 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 FBXO16Q8IX29 292 aaPredicted RBP11.88□□□□□ -0.51
LAMA4-201ENST00000230538 EXD1Q8NHP7 514 aa11.88□□□□□ -0.51
LAMA4-201ENST00000230538 KCTD14Q9BQ13 255 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms