RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 MARC1Q5VT66 337 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 POTEAQ6S8J7 498 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 RGS18Q9NS28 235 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 ITGA11Q9UKX5 1188 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 TNFSF13BQ9Y275 285 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 CD163L1Q9NR16 1453 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 SMIM22K7EJ46 135 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 TK2O00142 265 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 AGTP01019 485 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 TMEM253P0C7T8 217 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 PPATQ06203 517 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 LAMTOR4Q0VGL1 99 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 PCNX4Q63HM2 1172 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 FAM83AQ86UY5 434 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 CXorf40AQ8TE69 158 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 AGPAT3Q9NRZ7 376 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 GALNT8Q9NY28 637 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 PPIEQ9UNP9 301 aaKnown RBP10.88□□□□□ -0.67
TRPS1-201ENST00000220888 ZMYM2Q9UBW7 1377 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 E9PBE3 544 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 OR6A2O95222 327 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 SP100P23497 879 aaPredicted RBP10.88□□□□□ -0.67
TRPS1-201ENST00000220888 OR1E1P30953 314 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 SLC27A1Q6PCB7 646 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 FAM131BQ86XD5 332 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 SUGP1Q8IWZ8 645 aaKnown RBP10.88□□□□□ -0.67
TRPS1-201ENST00000220888 MYCBPQ99417 103 aaPredicted RBP10.88□□□□□ -0.67
TRPS1-201ENST00000220888 ZFYVE1Q9HBF4 777 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 GPRC5CQ9NQ84 441 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 KANSL1LA0AUZ9 987 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 FAM205CA6NFA0 338 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 H0YC42 278 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 RNF103O00237 685 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 ACSL4O60488 711 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 JCHAINP01591 159 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 OR56A5P0C7T3 313 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 GRK4P32298 578 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 MAGEA4P43358 317 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 CLK1P49759 484 aaKnown RBP10.87□□□□□ -0.67
TRPS1-201ENST00000220888 CYP24A1Q07973 514 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 LY6KQ17RY6 165 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 IQSEC1Q6DN90 963 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 LLGL2Q6P1M3 1020 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 TRMT2AQ8IZ69 625 aaKnown RBP10.87□□□□□ -0.67
TRPS1-201ENST00000220888 FAM136AQ96C01 138 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 ERLEC1Q96DZ1 483 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 SERPINB11Q96P15 392 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 PHACTR1Q9C0D0 580 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 ASCC2Q9H1I8 757 aaPredicted RBP10.87□□□□□ -0.67
TRPS1-201ENST00000220888 ASAH2Q9NR71 780 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 RAD54BQ9Y620 910 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 TRAV19A0A0A6YYK7 116 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 TEX28O15482 410 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 TLL1O43897 1013 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 PLIN5Q00G26 463 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 KBTBD12Q3ZCT8 623 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 ARHGAP17Q68EM7 881 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 CHADLQ6NUI6 762 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 SPATA21Q7Z572 469 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 CYP4X1Q8N118 509 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 IGDCC4Q8TDY8 1250 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 SMARCD1Q96GM5 515 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 ADAM2Q99965 735 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 RRN3Q9NYV6 651 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 AP4E1Q9UPM8 1137 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 TIMM44O43615 452 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 SRGNP10124 158 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 TCN1P20061 433 aaPredicted RBP10.87□□□□□ -0.67
TRPS1-201ENST00000220888 NPTX2P47972 431 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 BCL2L1Q07817 233 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 STK4Q13043 487 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 BOP1Q14137 746 aaKnown RBP10.87□□□□□ -0.67
TRPS1-201ENST00000220888 ACAD10Q6JQN1 1059 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 WDR49Q8IV35 697 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 CCT7Q99832 543 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 TRIM51Q9BSJ1 452 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 FRMD8P1Q9BZ68 369 aaPredicted RBP10.87□□□□□ -0.67
TRPS1-201ENST00000220888 ELOVL4Q9GZR5 314 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 NPHS2Q9NP85 383 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 MROH7Q68CQ1 1323 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 C1QTNF3-AMACRE9PGA6 284 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 H3BMM5 538 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 NFIAQ12857 509 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 FAXCQ5TGI0 409 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 LGI2Q8N0V4 545 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 USP7Q93009 1102 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 VPS33AQ96AX1 596 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 BBS2Q9BXC9 721 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 LRRC40Q9H9A6 602 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 SNX8Q9Y5X2 465 aa10.87□□□□□ -0.67
TRPS1-201ENST00000220888 ADGBQ8N7X0 1667 aa10.86□□□□□ -0.67
TRPS1-201ENST00000220888 PDE2AO00408 941 aaPredicted RBP10.86□□□□□ -0.67
TRPS1-201ENST00000220888 KRT33AO76009 404 aa10.86□□□□□ -0.67
TRPS1-201ENST00000220888 ADH1AP07327 375 aa10.86□□□□□ -0.67
TRPS1-201ENST00000220888 ZNF7P17097 686 aaPredicted RBP10.86□□□□□ -0.67
TRPS1-201ENST00000220888 CCR4P51679 360 aa10.86□□□□□ -0.67
TRPS1-201ENST00000220888 ERVK-9P63128 1117 aa10.86□□□□□ -0.67
TRPS1-201ENST00000220888 ERVK-24P63145 666 aa10.86□□□□□ -0.67
TRPS1-201ENST00000220888 TRIM32Q13049 653 aa10.86□□□□□ -0.67
TRPS1-201ENST00000220888 MTM1Q13496 603 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms