RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 CLPBQ9H078 707 aa18.4■□□□□ 0.54
EXTL3-201ENST00000220562 UBP1Q9NZI7 540 aa18.4■□□□□ 0.54
EXTL3-201ENST00000220562 HPSEQ9Y251 543 aa18.4■□□□□ 0.54
EXTL3-201ENST00000220562 DIP2AQ14689 1571 aa18.4■□□□□ 0.54
EXTL3-201ENST00000220562 SLC12A8A0AV02 714 aa18.39■□□□□ 0.54
EXTL3-201ENST00000220562 FBXO21O94952 628 aa18.39■□□□□ 0.54
EXTL3-201ENST00000220562 DLGAP3O95886 979 aa18.39■□□□□ 0.54
EXTL3-201ENST00000220562 GPC1P35052 558 aa18.39■□□□□ 0.54
EXTL3-201ENST00000220562 ARHGAP17Q68EM7 881 aa18.39■□□□□ 0.54
EXTL3-201ENST00000220562 TRAF7Q6Q0C0 670 aa18.39■□□□□ 0.54
EXTL3-201ENST00000220562 RXFP2Q8WXD0 754 aa18.39■□□□□ 0.54
EXTL3-201ENST00000220562 CXorf56Q9H5V9 222 aa18.39■□□□□ 0.54
EXTL3-201ENST00000220562 DYRK1BQ9Y463 629 aa18.39■□□□□ 0.54
EXTL3-201ENST00000220562 GLP2RO95838 553 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 BACE1P56817 501 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 FUT8Q9BYC5 575 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 COPS7BQ9H9Q2 264 aaPredicted RBP18.39■□□□□ 0.53
EXTL3-201ENST00000220562 ZSCAN32Q9NX65 697 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 SMNDC1O75940 238 aaKnown RBP eCLIP18.39■□□□□ 0.53
EXTL3-201ENST00000220562 LSM8O95777 96 aaKnown RBP18.39■□□□□ 0.53
EXTL3-201ENST00000220562 RHOCP08134 193 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 IRX1P78414 480 aaPredicted RBP18.39■□□□□ 0.53
EXTL3-201ENST00000220562 CHRNB3Q05901 458 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 PTAR1Q7Z6K3 402 aaPredicted RBP18.39■□□□□ 0.53
EXTL3-201ENST00000220562 PPP1R10Q96QC0 940 aaKnown RBP18.39■□□□□ 0.53
EXTL3-201ENST00000220562 IQSEC2Q5JU85 1478 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 TOMM70O94826 608 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 PSMC3P17980 439 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 ATP6V1B2P21281 511 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 LAMTOR4Q0VGL1 99 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 BMPR2Q13873 1038 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 PDP2Q9P2J9 529 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 SOX13Q9UN79 622 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 FAM205AQ6ZU69 1335 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 AKAP3O75969 853 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 CALB2P22676 271 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 NFIAQ12857 509 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 RASA2Q15283 850 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 KHDRBS2Q5VWX1 349 aaKnown RBP18.39■□□□□ 0.53
EXTL3-201ENST00000220562 TMEM169Q96HH4 297 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 CNPY3Q9BT09 278 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 RTFDC1Q9BY42 306 aaPredicted RBP18.39■□□□□ 0.53
EXTL3-201ENST00000220562 NDEL1Q9GZM8 345 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 DSEQ9UL01 958 aa18.39■□□□□ 0.53
EXTL3-201ENST00000220562 PIK3CDO00329 1044 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 GRIN3BO60391 1043 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 BST2Q10589 180 aaKnown RBP18.38■□□□□ 0.53
EXTL3-201ENST00000220562 RINLQ6ZS11 566 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 SLC26A11Q86WA9 606 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 GLMNQ92990 594 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 PIF1Q9H611 641 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 GPAMQ9HCL2 828 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 RAD18Q9NS91 495 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 CASTOR2A6NHX0 329 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 GZMAP12544 262 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 LHX1P48742 406 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 RPS7P62081 194 aaKnown RBP18.38■□□□□ 0.53
EXTL3-201ENST00000220562 RPL10AP62906 217 aaKnown RBP18.38■□□□□ 0.53
EXTL3-201ENST00000220562 ATP6AP1LQ52LC2 224 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 HERC6Q8IVU3 1022 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 CCDC103Q8IW40 242 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 KRT84Q9NSB2 600 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 VPS28Q9UK41 221 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 THP07101 528 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 CXCL8P10145 99 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 RHOAP61586 193 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 TMEM132BQ14DG7 1078 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 ZDHHC15Q96MV8 337 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 ZNF682O95780 498 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 TKTL1P51854 596 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 MMRN1Q13201 1228 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 CCNG2Q16589 344 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 SPATA31A5Q5VU36 1347 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 SPATA31A7Q8IWB4 1347 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 CASP10Q92851 521 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 ELMO3Q96BJ8 720 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 CNTNAP2Q9UHC6 1331 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 VANGL2Q9ULK5 521 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 ZC3H13Q5T200 1668 aaKnown RBP18.38■□□□□ 0.53
EXTL3-201ENST00000220562 ANXA11P50995 505 aaKnown RBP18.38■□□□□ 0.53
EXTL3-201ENST00000220562 ERMARDQ5T6L9 678 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 LUZP2Q86TE4 346 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 DDI1Q8WTU0 396 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 KCTD14Q9BQ13 255 aaPredicted RBP18.38■□□□□ 0.53
EXTL3-201ENST00000220562 RERGLQ9H628 205 aa18.38■□□□□ 0.53
EXTL3-201ENST00000220562 TM9SF1O15321 606 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 JCHAINP01591 159 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 CPA3P15088 417 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 KRT78Q8N1N4 520 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 TSEN34Q9BSV6 310 aaKnown RBP18.37■□□□□ 0.53
EXTL3-201ENST00000220562 UBXN6Q9BZV1 441 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 A0A087WZ62 844 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 ITGALP20701 1170 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 MRPS31Q92665 395 aaKnown RBP18.37■□□□□ 0.53
EXTL3-201ENST00000220562 TATDN2Q93075 761 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 FDXACB1Q9BRP7 624 aaPredicted RBP18.37■□□□□ 0.53
EXTL3-201ENST00000220562 EMILIN2Q9BXX0 1053 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 FAM180AQ6UWF9 173 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 ADGRA1Q86SQ6 560 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 GMCL1Q96IK5 515 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms