RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 HSDL1Q3SXM5 330 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 SLC9A4Q6AI14 798 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 RINLQ6ZS11 566 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 CDHR3Q6ZTQ4 885 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 FAM183BPQ6ZVS7 135 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 CDR2LQ86X02 465 aaPredicted RBP13.82□□□□□ -0.2
SRP54-201ENST00000216774 PRR11Q96HE9 360 aaPredicted RBP13.82□□□□□ -0.2
SRP54-201ENST00000216774 ZNF333Q96JL9 665 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 ETNK2Q9NVF9 386 aa13.82□□□□□ -0.2
SRP54-201ENST00000216774 FAM237BA0A1B0GVD1 139 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 GPR25O00155 361 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 RFPL1O75677 317 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 APOEP02649 317 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 MAGEA3P43357 314 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 RCN1Q15293 331 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 FAM187BQ17R55 369 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 C15orf59Q2T9L4 293 aaPredicted RBP13.81□□□□□ -0.2
SRP54-201ENST00000216774 ACSBG2Q5FVE4 666 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 OR6B2Q6IFH4 312 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 PQLC3Q8N755 202 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 UBA3Q8TBC4 463 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 E2F7Q96AV8 911 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 HPDLQ96IR7 371 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 NMUR2Q9GZQ4 415 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 SPATC1LQ9H0A9 340 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 WWP1Q9H0M0 922 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 NMRK1Q9NWW6 199 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 PPP2R3BQ9Y5P8 575 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 GJA3Q9Y6H8 435 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 MGAMO43451 1857 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 SLC15A5A6NIM6 579 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 CAPN14A8MX76 684 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 CXorf49A8MYA2 514 aaPredicted RBP13.81□□□□□ -0.2
SRP54-201ENST00000216774 E5RJQ4 531 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 MAGEC1O60732 1142 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 TOMM70O94826 608 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 ARIH2O95376 493 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 APRTP07741 180 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 GJB1P08034 283 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 RBL1P28749 1068 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 RAP1GDS1P52306 607 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 MRPS5P82675 430 aaKnown RBP13.81□□□□□ -0.2
SRP54-201ENST00000216774 POU5F1BQ06416 359 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 SLC34A1Q06495 639 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 STILQ15468 1287 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 SYCP2LQ5T4T6 812 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 TTC7BQ86TV6 843 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 STMN2Q93045 179 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 ZNF670Q9BS34 389 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 MINDY3Q9H8M7 445 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 PLAC1Q9HBJ0 212 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 GBA2Q9HCG7 927 aaPredicted RBP13.81□□□□□ -0.2
SRP54-201ENST00000216774 PCDH18Q9HCL0 1135 aa13.81□□□□□ -0.2
SRP54-201ENST00000216774 STX18Q9P2W9 335 aaKnown RBP13.81□□□□□ -0.2
SRP54-201ENST00000216774 BIRC5O15392 142 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 SKAP2O75563 359 aaPredicted RBP13.8□□□□□ -0.2
SRP54-201ENST00000216774 PSMG1O95456 288 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 STAU1O95793 577 aaKnown RBP13.8□□□□□ -0.2
SRP54-201ENST00000216774 DESP17661 470 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 NDST1P52848 882 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 TMPRSS15P98073 1019 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 KLC1Q07866 573 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 BST1Q10588 318 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 LBRQ14739 615 aaKnown RBP13.8□□□□□ -0.2
SRP54-201ENST00000216774 ZRSR2Q15696 482 aaKnown RBP13.8□□□□□ -0.2
SRP54-201ENST00000216774 TBCCQ15814 346 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 KYAT1Q16773 422 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 CCDC14Q49A88 953 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 TEX44Q53QW1 395 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 RAB6CQ53S08 254 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 SNX30Q5VWJ9 437 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 MAP1SQ66K74 1059 aaPredicted RBP13.8□□□□□ -0.2
SRP54-201ENST00000216774 EFCAB12Q6NXP0 572 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 EEPD1Q7L9B9 569 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 NCAPG2Q86XI2 1143 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 TMPRSS6Q8IU80 811 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 CDKL3Q8IVW4 592 aaPredicted RBP13.8□□□□□ -0.2
SRP54-201ENST00000216774 SMC1BQ8NDV3 1235 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.8□□□□□ -0.2
SRP54-201ENST00000216774 AFG1LQ8WV93 481 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 RAB6CQ9H0N0 254 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 ASCC2Q9H1I8 757 aaPredicted RBP13.8□□□□□ -0.2
SRP54-201ENST00000216774 SMARCAD1Q9H4L7 1026 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 ARHGEF4Q9NR80 690 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 ITGA11Q9UKX5 1188 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 LRCH1Q9Y2L9 728 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 HEY1Q9Y5J3 304 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 FAM159BA6NKW6 160 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 FZD9O00144 591 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 MDM4O15151 490 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 HBP1O60381 514 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 KRT36O76013 467 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 IQCF3P0C7M6 154 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 CYP3A5P20815 502 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 CRHR1P34998 444 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 PGM1P36871 562 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 PHKA2P46019 1235 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 SERPINB9P50453 376 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 DBN1Q16643 649 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms