RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 LGR5O75473 907 aa16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 TRUB2O95900 331 aaKnown RBP16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 APRTP07741 180 aa16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 TFE3P19532 575 aaPredicted RBP16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 EIF4BP23588 611 aaKnown RBP16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 NEK3P51956 506 aa16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 SLC18A1P54219 525 aa16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 ALDH18A1P54886 795 aaKnown RBP16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 MRPS5P82675 430 aaKnown RBP16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 CDK16Q00536 496 aa16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 KLHL38Q2WGJ6 581 aa16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 CELF3Q5SZQ8 465 aaKnown RBP16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 EFCAB3Q8N7B9 438 aa16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 ENDOVQ8N8Q3 282 aaKnown RBP16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 OXNAD1Q96HP4 312 aaPredicted RBP16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 EBF4Q9BQW3 602 aa16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 PPARGC1AQ9UBK2 798 aaKnown RBP16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 CORO1CQ9ULV4 474 aaPredicted RBP16.47■□□□□ 0.23
SNAPC1-201ENST00000216294 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 B2RBV5 119 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 E7ESA3 106 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 NVLO15381 856 aaKnown RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 CCDC22O60826 627 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 TOM1L1O75674 476 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 MICAL2O94851 1124 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 PIGRP01833 764 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 HMGCRP04035 888 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 ITGB3P05106 788 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 IGBP1P78318 339 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 ROR1Q01973 937 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 BST1Q10588 318 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 UBAP2LQ14157 1087 aaKnown RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 C16orf46Q6P387 395 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 SPDYE1Q8NFV5 336 aaPredicted RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 SPATA33Q96N06 139 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 CXCL16Q9H2A7 254 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 PCMTD2Q9NV79 361 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 TEX264Q9Y6I9 313 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 MCM3APO60318 1980 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 ANK1P16157 1881 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 COPEO14579 308 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 LYPLA1O75608 230 aaPredicted RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 LSM8O95777 96 aaKnown RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 CSH1P0DML2 217 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 CSH2P0DML3 217 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 CLCN3P51790 818 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 HADHQ16836 314 aaKnown RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 PPP6R3Q5H9R7 873 aaPredicted RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 WASHC2DQ5SRD0 308 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 GJC2Q5T442 439 aaPredicted RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 CEP128Q6ZU80 1094 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 PDCD7Q8N8D1 485 aaKnown RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 SLC4A11Q8NBS3 891 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 USP6NLQ92738 828 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 APOPT1Q96IL0 206 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 ZNF333Q96JL9 665 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 MPHOSPH6Q99547 160 aaKnown RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 ADPGKQ9BRR6 497 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 VPS11Q9H270 941 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 DCLRE1BQ9H816 532 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 CPSF3Q9UKF6 684 aaKnown RBP16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 MAD1L1Q9Y6D9 718 aa16.46■□□□□ 0.23
SNAPC1-201ENST00000216294 APOC4-APOC2K7ER74 178 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 TRAFD1O14545 582 aaPredicted RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 ABLIM1O14639 778 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 MAFO75444 373 aaPredicted RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 APOC2P02655 101 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 KRT7P08729 469 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 CYP3A5P20815 502 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 YWHAZP63104 245 aaKnown RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 TMPRSS15P98073 1019 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 CHI3L2Q15782 390 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 CYP4V2Q6ZWL3 525 aaPredicted RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 PCGF5Q86SE9 256 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 NIPA2Q8N8Q9 360 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 SLC44A1Q8WWI5 657 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 HEXIM2Q96MH2 286 aaKnown RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 MROH8Q9H579 483 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 TLE6Q9H808 572 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 LNPEPQ9UIQ6 1025 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 MFHAS1Q9Y4C4 1052 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 ZNF638Q14966 1978 aaKnown RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 OGTO15294 1046 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 TM9SF1O15321 606 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 PSMG1O95456 288 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 UBTFL6P0CB48 400 aaPredicted RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 PGM1P36871 562 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 YWHAEP62258 255 aaKnown RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 PEX6Q13608 980 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 OR6B2Q6IFH4 312 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 CCDC62Q6P9F0 684 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 C1orf127Q8N9H9 656 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 ZNF483Q8TF39 744 aaPredicted RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 PPP1R13LQ8WUF5 828 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 RXFP2Q8WXD0 754 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 MRPL4Q9BYD3 311 aaKnown RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 CEP41Q9BYV8 373 aa16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 IQCGQ9H095 443 aaKnown RBP16.45■□□□□ 0.22
SNAPC1-201ENST00000216294 NGRNQ9NPE2 291 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms