RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 MCEEQ96PE7 176 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 HERPUD2Q9BSE4 406 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 ALG13Q9NP73 1137 aaKnown RBP11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 AAASQ9NRG9 546 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 SCN10AQ9Y5Y9 1956 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 NPTXRO95502 500 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 ITGBL1O95965 494 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 GAS8O95995 478 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 MYZAPP0CAP1 466 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 HOXA11P31270 313 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 PURAQ00577 322 aaKnown RBP11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 CAV1Q03135 178 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 KRT17Q04695 432 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 SLMAPQ14BN4 828 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 PPP1R7Q15435 360 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 ZBTB6Q15916 424 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 PLA2G4EQ3MJ16 856 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 CEP85LQ5SZL2 805 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 KIAA1614Q5VZ46 1190 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 DRICH1Q6PGQ1 229 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 C17orf99Q6UX52 265 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 CCDC50Q8IVM0 306 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 FBXO25Q8TCJ0 367 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 C1orf54Q8WWF1 131 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 SOCS4Q8WXH5 440 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 SLITRK1Q96PX8 696 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 FLRT1Q9NZU1 646 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 ZMYM5Q9UJ78 669 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 O00370 1275 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 TIPRLO75663 272 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 MICAL2O94851 1124 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 CYP2C9P11712 490 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 ITIH2P19823 946 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 RGS2P41220 211 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 PMS2P54278 862 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 PLTPP55058 493 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 CDH8P55286 799 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 OGDHQ02218 1023 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 MYO1EQ12965 1108 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 ACAP1Q15027 740 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 KIZQ2M2Z5 673 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 ZNF449Q6P9G9 518 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 C6orf15Q6UXA7 325 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 CATSPER4Q7RTX7 472 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 CROCCP2Q86T23 111 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 LRRC52Q8N7C0 313 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 ATXN2LQ8WWM7 1075 aaKnown RBP11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 MCRS1Q96EZ8 462 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 TWNKQ96RR1 684 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 KATNAL1Q9BW62 490 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 MIS12Q9H081 205 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 PABPC3Q9H361 631 aaKnown RBP11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 CHST7Q9NS84 486 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 IRAK4Q9NWZ3 460 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 SUN2Q9UH99 717 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 CYTH4Q9UIA0 394 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 NEU2Q9Y3R4 380 aa11.09□□□□□ -0.63
APOBEC3D-201ENST00000216099 KRT1P04264 644 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 HOXC8P31273 242 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 LCLAT1Q6UWP7 414 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 ALKAL1Q6UXT8 129 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 XYLT1Q86Y38 959 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 BBOF1Q8ND07 529 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 FBXO27Q8NI29 283 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 SNF8Q96H20 258 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 AP5M1Q9H0R1 490 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 EPB41L4BQ9H329 900 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 HMGXB4Q9UGU5 601 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 FOXD3Q9UJU5 478 aaPredicted RBP11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 TMEM229AB2RXF0 380 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 TJP3O95049 919 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 MAP2K2P36507 400 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 KCNJ1P48048 391 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 YARSP54577 528 aaKnown RBP11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 PSMC1P62191 440 aaKnown RBP11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 CALCOCO2Q13137 446 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 CYP4A22Q5TCH4 519 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 SH3PXD2AQ5TCZ1 1133 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 RHBDF2Q6PJF5 856 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 LRRC31Q6UY01 552 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 SPOCD1Q6ZMY3 1216 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 TADA2BQ86TJ2 420 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 CNTD1Q8N815 330 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 BEST2Q8NFU1 509 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 TMEM109Q9BVC6 243 aa11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 FRMD8P1Q9BZ68 369 aaPredicted RBP11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 R3HDM2Q9Y2K5 976 aaKnown RBP11.08□□□□□ -0.64
APOBEC3D-201ENST00000216099 A0A087WUV0 522 aaPredicted RBP11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 TRIM64CA6NLI5 447 aa11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 SETSIPP0DME0 302 aa11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 KRT3P12035 628 aa11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 RARGP13631 454 aa11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 IVDP26440 423 aa11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 GPD2P43304 727 aa11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 ZNF157P51786 506 aaPredicted RBP11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 NDST1P52848 882 aa11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 TAZQ16635 292 aa11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 WDR45BQ5MNZ6 344 aa11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 PRAMEF19Q5SWL8 479 aa11.07□□□□□ -0.64
APOBEC3D-201ENST00000216099 DAB2IPQ5VWQ8 1189 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms