RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 OR6Y1Q8NGX8 325 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 WRNIP1Q96S55 665 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 PDP2Q9P2J9 529 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 CNTNAP2Q9UHC6 1331 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 MAST2Q6P0Q8 1798 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 USP46P62068 366 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 ZNF699Q32M78 642 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 SPDYE2Q495Y8 402 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 DPY19L2Q6NUT2 758 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 ENOSF1Q7L5Y1 443 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 ZNF276Q8N554 614 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 PDCD2LQ9BRP1 358 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 PCDHGB4Q9UN71 923 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 PCDHGB5Q9Y5G0 923 aa17.38■□□□□ 0.37
CTDP1-201ENST00000075430 CALB1P05937 261 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 NR3C2P08235 984 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 GK3PQ14409 553 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 FASTKD1Q53R41 847 aaKnown RBP17.37■□□□□ 0.37
CTDP1-201ENST00000075430 ATG16L1Q676U5 607 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 TDRPQ86YL5 185 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 C4orf19Q8IY42 314 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 MYOZ2Q9NPC6 264 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 ARHGEF4Q9NR80 690 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 ADAMTS6Q9UKP5 1117 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 WDR75Q8IWA0 830 aaKnown RBP17.37■□□□□ 0.37
CTDP1-201ENST00000075430 RAB3IL1Q8TBN0 382 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 NLRP4Q96MN2 994 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 AGAP3Q96P47 875 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 CPXM1Q96SM3 734 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 TUBB6Q9BUF5 446 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 SPATA16Q9BXB7 569 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 TMEM165Q9HC07 324 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 HEMK1Q9Y5R4 338 aaPredicted RBP17.37■□□□□ 0.37
CTDP1-201ENST00000075430 ANKRD12Q6UB98 2062 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 GOLGA8TH3BQL2 631 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 M0QYV0 167 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 TRAFD1O14545 582 aaPredicted RBP17.37■□□□□ 0.37
CTDP1-201ENST00000075430 HSF5Q4G112 596 aaPredicted RBP17.37■□□□□ 0.37
CTDP1-201ENST00000075430 EFHC1Q5JVL4 640 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 SLC26A11Q86WA9 606 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 ERLEC1Q96DZ1 483 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 HEXIM2Q96MH2 286 aaKnown RBP17.37■□□□□ 0.37
CTDP1-201ENST00000075430 ADPGKQ9BRR6 497 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 XAB2Q9HCS7 855 aaKnown RBP17.37■□□□□ 0.37
CTDP1-201ENST00000075430 CYP26B1Q9NR63 512 aa17.37■□□□□ 0.37
CTDP1-201ENST00000075430 INO80B-WBP1J3KQ70 363 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 EDN1P05305 212 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 ITGAVP06756 1048 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 GSTA2P09210 222 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 RXRBP28702 533 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 C1QBPQ07021 282 aaKnown RBP17.36■□□□□ 0.37
CTDP1-201ENST00000075430 EMC2Q15006 297 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 DLK2Q6UY11 383 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.36■□□□□ 0.37
CTDP1-201ENST00000075430 ARFGAP1Q8N6T3 406 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 FAM156AQ8NDB6 213 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 ATP6V0A1Q93050 837 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 OPTNQ96CV9 577 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 INO80BQ9C086 356 aaPredicted RBP17.36■□□□□ 0.37
CTDP1-201ENST00000075430 KLHL4Q9C0H6 718 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 GALNT8Q9NY28 637 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 TM7SF2O76062 418 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 MRPS22P82650 360 aaKnown RBP17.36■□□□□ 0.37
CTDP1-201ENST00000075430 OLIG2Q13516 323 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 TCEAL1Q15170 157 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 TTC39BQ5VTQ0 682 aaPredicted RBP17.36■□□□□ 0.37
CTDP1-201ENST00000075430 PCGF5Q86SE9 256 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 C12orf56Q8IXR9 622 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 RTKN2Q8IZC4 609 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 TTC16Q8NEE8 873 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 SLC35B2Q8TB61 432 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 PIWIL1Q96J94 861 aaKnown RBP17.36■□□□□ 0.37
CTDP1-201ENST00000075430 LIN28AQ9H9Z2 209 aaKnown RBP17.36■□□□□ 0.37
CTDP1-201ENST00000075430 STRIP2Q9ULQ0 834 aa17.36■□□□□ 0.37
CTDP1-201ENST00000075430 XPO1O14980 1071 aaKnown RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 HMGCRP04035 888 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 PDGFRAP16234 1089 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 BCAR1P56945 870 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 IGBP1P78318 339 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 PTP4A2Q12974 167 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 ITGA9Q13797 1035 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 PIGHQ14442 188 aaPredicted RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 N4BP2L1Q5TBK1 243 aaPredicted RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 MARK2Q7KZI7 788 aaKnown RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 WDTC1Q8N5D0 677 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 ZSCAN18Q8TBC5 510 aaPredicted RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 PPP4R1Q8TF05 950 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 CLMNQ96JQ2 1002 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 PRPF18Q99633 342 aaKnown RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 FOXP3Q9BZS1 431 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 FAM49BQ9NUQ9 324 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 TXNDC16Q9P2K2 825 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 USP18Q9UMW8 372 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 LTBP4Q8N2S1 1624 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 SPDYE16A6NNV3 312 aaPredicted RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 USP12O75317 370 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 OSBPP22059 807 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 RBM44Q6ZP01 1051 aaKnown RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 PHF13Q86YI8 300 aaPredicted RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 SLC44A1Q8WWI5 657 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms