RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ROPN1Q9HAT0 212 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 RCOR3Q9P2K3 495 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 SAE1Q9UBE0 346 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 TIMM13Q9Y5L4 95 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 TSC2P49815 1807 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 HHLA1C9JL84 531 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 KBTBD13C9JR72 458 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 APOL1O14791 398 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 TTC4O95801 387 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 SELPP16109 830 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 L1CAMP32004 1257 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 TKTL1P51854 596 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 MAP3K7CLP57077 242 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 GPS1Q13098 491 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 MAPRE1Q15691 268 aaKnown RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 KRT71Q3SY84 523 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 ZC3H12AQ5D1E8 599 aaKnown RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 RNASEH2BQ5TBB1 312 aaKnown RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 LRRC8DQ7L1W4 858 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 PCDH19Q8TAB3 1148 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 P3H4Q92791 437 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 PNPLA8Q9NP80 782 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 KANSL3Q9P2N6 904 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 STAP1Q9ULZ2 295 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 PCDHB8Q9UN66 801 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 INPP5FQ9Y2H2 1132 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 CFAP69A5D8W1 941 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 DNM1LO00429 736 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 SHBGP04278 402 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 ZSCAN5DPP0CG00 497 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 RBP3P10745 1247 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 ZFXP17010 805 aaPredicted RBP14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 BRCC3P46736 316 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 LMAN1P49257 510 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 DAOAP59103 153 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 CA9Q16790 459 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 OTUD1Q5VV17 481 aaPredicted RBP14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 KCTD16Q68DU8 428 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 PRUNE1Q86TP1 453 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 SH2D3CQ8N5H7 860 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 ARFGAP2Q8N6H7 521 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 RSAD2Q8WXG1 361 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 IRGQQ8WZA9 623 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 TLCD1Q96CP7 247 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 RTP4Q96DX8 246 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 SLC9A7Q96T83 725 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 ELAC1Q9H777 363 aaKnown RBP14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 POPDC2Q9HBU9 364 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 GPATCH2LQ9NWQ4 482 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 MTMR10Q9NXD2 777 aa14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 FARP1Q9Y4F1 1045 aaPredicted RBP14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 TDRD15B5MCY1 1934 aaKnown RBP14.91□□□□□ -0.02
RTFDC1-201ENST00000023939 TCEA3O75764 348 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 ETS1P14921 441 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 NR1D1P20393 614 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 RDXP35241 583 aaKnown RBP14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 AIF1P55008 147 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 ROR1Q01973 937 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 BFSP2Q13515 415 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 NOMO2Q5JPE7 1267 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 CLLU1OSQ5K130 101 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 C6orf118Q5T5N4 469 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 MFSD5Q6N075 450 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 CCDC25Q86WR0 208 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 FAM126BQ8IXS8 530 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 THEM5Q8N1Q8 247 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 URGCPQ8TCY9 931 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 MYLPFQ96A32 169 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 FAM149B1Q96BN6 582 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 ULBP1Q9BZM6 244 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 NRDE2Q9H7Z3 1164 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 TMEM161AQ9NX61 479 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 RRN3Q9NYV6 651 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 AP4E1Q9UPM8 1137 aa14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 COL4A4P53420 1690 aaPredicted RBP14.9□□□□□ -0.02
RTFDC1-201ENST00000023939 BCLAF3A2AJT9 711 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 ABHD2P08910 425 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 RPL22P35268 128 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 NDUFV1P49821 464 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 SULT1E1P49888 294 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 GDF10P55107 478 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 BCAR1P56945 870 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 CBLBQ13191 982 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 XRCC4Q13426 336 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 TNFAIP8L3Q5GJ75 292 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 PM20D1Q6GTS8 502 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 OVOS1Q6IE37 1185 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 BEND5Q7L4P6 421 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 UNC45BQ8IWX7 931 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 PPIL6Q8IXY8 311 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 PRCCQ92733 491 aaPredicted RBP14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 PGAP3Q96FM1 320 aaPredicted RBP14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 TMEM30AQ9NV96 361 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 NINJ2Q9NZG7 142 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 CALCOCO1Q9P1Z2 691 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 FZD10Q9ULW2 581 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 I3L4J1 428 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms