RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 ATL2Q8NHH9 583 aa11.03□□□□□ -0.64
CD4-201ENST00000011653 MDM1Q8TC05 714 aa11.03□□□□□ -0.64
CD4-201ENST00000011653 SUSD3Q96L08 255 aa11.03□□□□□ -0.64
CD4-201ENST00000011653 RTP3Q9BQQ7 232 aa11.03□□□□□ -0.64
CD4-201ENST00000011653 MRPL9Q9BYD2 267 aaKnown RBP11.03□□□□□ -0.64
CD4-201ENST00000011653 EPB41L4BQ9H329 900 aa11.03□□□□□ -0.64
CD4-201ENST00000011653 LRRC4CQ9HCJ2 640 aa11.03□□□□□ -0.64
CD4-201ENST00000011653 SLC4A7Q9Y6M7 1214 aa11.03□□□□□ -0.64
CD4-201ENST00000011653 C5orf42Q9H799 3197 aa11.03□□□□□ -0.64
CD4-201ENST00000011653 TLDC2A0PJX2 215 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 TTC36A6NLP5 189 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 CHUKO15111 745 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 MMP8P22894 467 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 RDXP35241 583 aaKnown RBP11.02□□□□□ -0.64
CD4-201ENST00000011653 GRIK1P39086 918 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 ATP11AP98196 1134 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 ADCY2Q08462 1091 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 TCEAL1Q15170 157 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 C9orf50Q5SZB4 431 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 FAM109BQ6ICB4 259 aaPredicted RBP11.02□□□□□ -0.64
CD4-201ENST00000011653 LCLAT1Q6UWP7 414 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 TRIM72Q6ZMU5 477 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 PIGZQ86VD9 579 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 JOSD2Q8TAC2 188 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 UROC1Q96N76 676 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 HTATIP2Q9BUP3 242 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 STMN4Q9H169 189 aaPredicted RBP11.02□□□□□ -0.64
CD4-201ENST00000011653 TMEM30AQ9NV96 361 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 TRIOBPQ9H2D6 2365 aa11.02□□□□□ -0.64
CD4-201ENST00000011653 TLL1O43897 1013 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 PFKMP08237 780 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 SPATA31D3P0C874 917 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 CHN1P15882 459 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 PTGIRP43119 386 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 GPR15P49685 360 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 SLC8A3P57103 927 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 ADIGQ0VDE8 80 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 LACTB2Q53H82 288 aaPredicted RBP11.02□□□□□ -0.65
CD4-201ENST00000011653 TMEM240Q5SV17 173 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 SPATA31D4Q6ZUB0 917 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 UBE2Q1Q7Z7E8 422 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 SPATA2LQ8IUW3 424 aaPredicted RBP11.02□□□□□ -0.65
CD4-201ENST00000011653 PRELID2Q8N945 189 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 CCDC197Q8NCU1 140 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 LRRC4Q9HBW1 653 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 GRHL1Q9NZI5 618 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 PCYOX1Q9UHG3 505 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 SF3B1O75533 1304 aaKnown RBP eCLIP11.02□□□□□ -0.65
CD4-201ENST00000011653 F8VP50 259 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 AGTP01019 485 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 FAM200BP0CF97 657 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 KRT3P12035 628 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 COMTP21964 271 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 CTNNA2P26232 953 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 RFC2P35250 354 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 RFC1P35251 1148 aaPredicted RBP11.02□□□□□ -0.65
CD4-201ENST00000011653 MARCKSL1P49006 195 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 DDR2Q16832 855 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 C6orf118Q5T5N4 469 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 AADACL2Q6P093 401 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 FAM35AQ86V20 835 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 TAX1BP1Q86VP1 789 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 ANKS4BQ8N8V4 417 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 KRT35Q92764 455 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
CD4-201ENST00000011653 RUNDC3BQ96NL0 473 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 TSPAN18Q96SJ8 248 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 SEPT5Q99719 369 aaPredicted RBP11.02□□□□□ -0.65
CD4-201ENST00000011653 NCAPGQ9BPX3 1015 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 CDY1Q9Y6F8 540 aa11.02□□□□□ -0.65
CD4-201ENST00000011653 SZT2Q5T011 3432 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 MICAL3Q7RTP6 2002 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 SMIM23A6NLE4 172 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 GABRDO14764 452 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 ADAM12O43184 909 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 ATP2A2P16615 1042 aaKnown RBP11.01□□□□□ -0.65
CD4-201ENST00000011653 MMP13P45452 471 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 RPL21P46778 160 aaKnown RBP11.01□□□□□ -0.65
CD4-201ENST00000011653 MAMLD1Q13495 774 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 SLC29A2Q14542 456 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 SLMAPQ14BN4 828 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 CCDC137Q6PK04 289 aaKnown RBP11.01□□□□□ -0.65
CD4-201ENST00000011653 FAM183BPQ6ZVS7 135 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 PAQR9Q6ZVX9 377 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 CRYBG2Q8N1P7 616 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 TMEM86AQ8N2M4 240 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 TTC39CQ8N584 583 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 ZNF558Q96NG5 402 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 ALG13Q9NP73 1137 aaKnown RBP11.01□□□□□ -0.65
CD4-201ENST00000011653 PCSK1NQ9UHG2 260 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 NUDT5Q9UKK9 219 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 PCDHGC3Q9UN70 934 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 RALGAPA2Q2PPJ7 1873 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 CHD9Q3L8U1 2897 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 SCTRP47872 440 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 BCAT1P54687 386 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 BST2Q10589 180 aaKnown RBP11.01□□□□□ -0.65
CD4-201ENST00000011653 MGAT5BQ3V5L5 792 aa11.01□□□□□ -0.65
CD4-201ENST00000011653 INTS6LQ5JSJ4 861 aaKnown RBP11.01□□□□□ -0.65
CD4-201ENST00000011653 SCYL2Q6P3W7 929 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms