RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Mtmr10Q7TPM9 771 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Aldh3b1Q80VQ0 468 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Baiap2l2Q80Y61 522 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Spon2Q8BMS2 330 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Dennd2aQ8C4S8 1000 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Zfp446Q8C9M8 523 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Znf445Q8R2V3 986 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Spon1Q8VCC9 807 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Olfr395Q8VGR3 312 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pcdha9Q91Y11 979 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tbrg4Q91YM4 630 aaKnown RBP9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 DarsQ922B2 501 aaKnown RBP9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 SprtnG3X912 497 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 CblP22682 913 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gdpd4Q3TT99 632 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pitpnm3Q3UHE1 974 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 HpseQ6YGZ1 535 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Zfyve1Q810J8 777 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Q8BWQ6 963 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 ReltQ8BX43 436 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Vps39Q8R5L3 886 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Arhgef3Q91X46 524 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Lztr1Q9CQ33 837 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Net1Q9Z206 595 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ifit3bE9PV48 403 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tcf3P15806 651 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Npas2P97460 816 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rmdn3Q3UJU9 470 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Capn11Q6J756 714 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tmc3Q7TQ69 1130 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Vwa5aQ99KC8 793 aaKnown RBP9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Dnajc19Q9CQV7 116 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Atp6v1g2Q9WTT4 118 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Krt1P04104 637 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ass1P16460 412 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Afap1l2Q5DTU0 825 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Bcar1Q61140 874 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 NcaphQ8C156 731 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 HlcsQ920N2 722 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ppp1r3aQ99MR9 1089 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ndufaf1Q9CWX2 328 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 S100pbpQ9D5K4 396 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Psmd12Q9D8W5 456 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Olig1Q9JKN5 260 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tfr2Q9JKX3 798 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mettl1Q9Z120 268 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Magea10A2AMW4 325 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gnat1P20612 350 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pou2f3P31362 431 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ppp3caP63328 521 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 1810065E05RikQ5NC41 235 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Slc38a7Q8BWH0 463 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Fcho1Q8K285 873 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gtf2h3Q8VD76 309 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pcdhb11Q91UZ8 797 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rhobtb2Q91V93 728 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 CygbQ9CX80 190 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Snx5Q9D8U8 404 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 March8Q9DBD2 286 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rps6kb2Q9Z1M4 485 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Nav1Q8CH77 1875 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ccdc8D3YZV8 685 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Galnt4O08832 578 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 CpzQ8R4V4 654 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Homer3Q99JP6 356 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ears2Q9CXJ1 523 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Wdr49A0A0N4SUK7 710 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tada2bD3Z4Z0 420 aaKnown RBP9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Oog1E9Q5G7 496 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Banf1O54962 89 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pde9aO70628 534 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 R3hdm4Q4VBF2 262 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Myl6Q60605 151 aaKnown RBP9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Arl13bQ640N2 427 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Them6Q80ZW2 207 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 SpidrQ8BGX7 933 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mkl1Q8K4J6 964 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 HyiQ8R1F5 277 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ptdss1Q99LH2 473 aaKnown RBP9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 CdylQ9WTK2 593 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ppp1r36D3Z0R2 411 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Apol11bE9PUZ0 337 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Trim15G3UY57 292 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ccnd2P30280 289 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Trappc12Q8K2L8 797 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Sh2d3cQ9QZS8 854 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Arhgef37A1IGU4 676 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Lipo2D3YY49 398 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gcnt4E9Q649 455 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Bnip2O54940 326 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Irf8P23611 424 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Krt73Q6NXH9 539 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Idh3bQ91VA7 384 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ggt7Q99JP7 662 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Sytl2Q99N50 950 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mpp2Q9WV34 552 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Chd2E9PZM4 1827 aaKnown RBP9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pitpnm2Q6ZPQ6 1335 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rnf19bA2A7Q9 732 aa9.5□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ifi206G3UZV2 921 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms