RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Slc22a3Q9WTW5 551 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Rtl9Q32KG4 1339 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Col4a6B1AVK5 1691 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Gm21293E9Q4G9 266 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Rgs22G3UYX5 1258 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Sypl2O89104 264 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Fam167bP17257 162 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Cyp17a1P27786 507 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Itga11P61622 1188 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 SbdsP70122 250 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Prss36Q5K2P8 849 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 CttnQ60598 546 aaKnown RBP22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Spag7Q7TNE3 227 aaKnown RBP22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Sh3rf3Q8C120 878 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Gle1Q8R322 699 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Angel1Q8VCU0 667 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Isl2Q9CXV0 359 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Cul1Q9WTX6 776 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 A930018M24RikB7ZMY3 218 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Cyp2t4E9PWV0 503 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Lmod3E9QA62 571 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 E9QMW4 1145 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Zfp850J3QPC5 689 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Marcksl1P28667 200 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Slc12a2P55012 1205 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Abi2P62484 446 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 PkdccQ5RJI4 492 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Trim38Q5SZ99 471 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Syn2Q64332 586 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Q80Y73 168 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 OafQ8QZR4 282 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Slc35f5Q8R314 524 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 SarafQ8R3Q0 334 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Fkbp6Q91XW8 327 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Fam114a1Q9D281 569 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Q9D9D9 101 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Caln1Q9JJG7 219 aa22.08■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Fgf15O35622 218 aa22.07■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 PrlP06879 226 aa22.07■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Glb1P23780 647 aa22.07■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Fut7Q11131 389 aa22.07■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 ToporsQ80Z37 1033 aa22.07■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ttc24Q8BYG0 334 aa22.07■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Mcoln1Q99J21 580 aa22.07■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ddit4Q9D3F7 229 aa22.07■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 NbnQ9R207 751 aa22.07■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 PcntP48725 2898 aa22.07■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Grem1O70326 184 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pgk1P09411 417 aaKnown RBP22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 9130409I23RikQ3TS87 320 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ccndbp1Q3TVC7 356 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Dnajc1Q61712 552 aaKnown RBP22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Cyp3a13Q64464 503 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Colgalt2Q6NVG7 625 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Erlin1Q91X78 346 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pcdha10Q91Y20 946 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Q922M7 232 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Mrps2Q924T2 291 aaKnown RBP22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Eps8l2Q99K30 729 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pramel1Q99MW3 458 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Q9D4A5 307 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Strn3Q9ERG2 796 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Bmp15Q9Z0L4 392 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Zkscan5Q9Z1D8 819 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Apol7bB1AQP7 369 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pate1E9Q658 125 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Dnajc21E9Q8D0 531 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Speer2E9Q9U2 264 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Sec24cG3X972 1096 aaKnown RBP22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pim1P06803 397 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Slc11a2P49282 568 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 RabggtbP53612 339 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Apol7eQ3UZ24 369 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Mon1aQ6PDG8 556 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Sytl5Q80T23 753 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Fam118bQ8C569 351 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Tcf25Q8R3L2 676 aaKnown RBP22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Sh2b1Q91ZM2 756 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Wdr83Q9DAJ4 315 aaKnown RBP22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pak1ip1Q9DCE5 382 aaKnown RBP22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Rassf7Q9DD19 359 aa22.06■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pcsk6F6XJP7 959 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Usp4P35123 962 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 FynP39688 537 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Hrh2P97292 397 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Dpysl3Q62188 570 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Myo6Q64331 1265 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Tsga10Q6NY15 697 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Vmn2r43Q80Z08 845 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ttc22Q8C159 568 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Q8C1R3 189 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pcdhb6Q91XZ4 772 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ly6kQ9CWP4 154 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 LrmdaQ9D9B4 229 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Tmem174Q9DCX7 243 aa22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Scyl1Q9EQC5 806 aaKnown RBP22.05■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Tmem237Q3V0J1 427 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Cldn11Q60771 207 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Orc2Q60862 576 aaKnown RBP22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Slco2b1Q8BXB6 683 aa22.04■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms