RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Sh3rf3Q8C120 878 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ints5Q8CHT3 1018 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ces4aQ8R0W5 563 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Gstm4Q8R5I6 218 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 YwhabQ9CQV8 246 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Sh2b2Q9JID9 621 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Znf804aA2AKY4 1200 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Cyp2c23E9Q5K4 494 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Magea4F2Z493 315 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Angpt2O35608 496 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Marcksl1P28667 200 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Defa8P50706 81 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Scn1bP97952 218 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Spata5Q3UMC0 893 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Brinp3Q499E0 766 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Sdf4Q61112 361 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Atg16l2Q6KAU8 623 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tmc3Q7TQ69 1130 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Atxn2lQ7TQH0 1049 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Vac14Q80WQ2 782 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ms4a5Q810P8 197 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Stau2Q8CJ67 570 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Chst12Q99LL3 419 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Them5Q9CQJ0 248 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Polr3hQ9D2C6 204 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Styxl1Q9DAR2 321 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Krt81Q9ERE2 481 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Cpsf3Q9QXK7 684 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Olfr271-ps1A0A1L1SQH2 283 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 D830030K20RikE9PYQ5 218 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Gm3043K7N693 218 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 MrasO08989 208 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 AurkbO70126 345 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ppargc1aO70343 797 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Serpina6Q06770 397 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Spc25Q3UA16 226 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Cyp2j11Q3UNV2 504 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Rcsd1Q3UZA1 412 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 SpdyaQ5IBH7 310 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Shroom1Q5SX79 823 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Klhl17Q6TDP3 640 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Arhgap15Q811M1 481 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Rusc1Q8BG26 893 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Fbxw8Q8BIA4 598 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Vps37aQ8CHS8 397 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Fbxw7Q8VBV4 629 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Bhmt2Q91WS4 363 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Prpf19Q99KP6 504 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ten1Q9D7K2 161 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Rbp7Q9EPC5 134 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ruvbl2Q9WTM5 463 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pnpla6Q3TRM4 1355 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 1600015I10RikE9Q745 711 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ebf3O08791 596 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Vti1bO88384 232 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tfcp2l1Q3UNW5 479 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Clec12aQ504P2 267 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Lrrc8bQ5DU41 803 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Nars2Q8BGV0 477 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Gtf3c4Q8BMQ2 817 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Smim5Q8BT42 78 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Arhgef19Q8BWA8 802 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 CherpQ8CGZ0 936 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Snapc1Q8K0S9 389 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ccdc59Q8R2N0 240 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Oxnad1Q8VE38 311 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 DaglbQ91WC9 669 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Mtmr4Q91XS1 1190 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Q99KU6 348 aa10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ddx39bQ9Z1N5 428 aaKnown RBP10.55□□□□□ -0.72
Lig4-201ENSMUST00000095476 Adgrb3Q80ZF8 1522 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Zscan4-ps1A0A1C7CYV3 506 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Zscan4dA7KBS4 506 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Sema6aO35464 1031 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Grem2O88273 168 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Cyp2d9P11714 504 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 FesP16879 822 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 OatP29758 439 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Cdh5P55284 784 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Sephs2P97364 452 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Zscan4fQ3URS2 506 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Cspg5Q71M36 566 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Gpr141Q7TQP0 305 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Zscan4cQ80VJ6 506 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Aldh3b1Q80VQ0 468 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pdk1Q8BFP9 434 aaKnown RBP10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Nemp2Q8CB65 421 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Cog3Q8CI04 820 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 OlahQ8R197 265 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Rxfp2Q91ZZ5 737 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tnfaip8Q921Z5 198 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 HnrnpabQ99020 285 aaKnown RBP10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Anxa13Q99JG3 317 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ppp1r3gQ9CW07 347 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tlr5Q9JLF7 859 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ercc6l2Q9JIM3 1537 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tns3Q5SSZ5 1440 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 MndalD0QMC3 538 aaKnown RBP10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Lipo2D3YY49 398 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pgbd1E9Q492 415 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms