RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Mrgprb8Q7TN51 330 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Atp6v1hQ8BVE3 483 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Zhx2Q8C0C0 836 aaKnown RBP12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 RybpQ8CCI5 228 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ccdc17Q8CE13 565 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Plekhg6Q8R0J1 787 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cdyl2Q9D5D8 503 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 LrmdaQ9D9B4 229 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Scnn1bQ9WU38 638 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Kdelc2G5E897 503 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 OmdO35103 423 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 AfpP02772 605 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Olfr212Q7TS33 327 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 ClyblQ8R4N0 338 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Morc1Q9WVL5 950 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pstpip1P97814 415 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 LvrnQ2KHK3 559 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ccdc69Q3TCJ8 202 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gpr141Q7TQP0 305 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Spice1Q8C804 860 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gal3st3P61315 431 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Klra9Q2TJJ8 266 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Nutm2Q3V0C3 733 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Trex1Q91XB0 314 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Smim11aQ99J19 55 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Myo5cE9Q1F5 1742 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Trmt1lA2RSY6 728 aaKnown RBP12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Drg1P32233 367 aaKnown RBP12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Lad1P57016 528 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Bbs1Q3V3N7 593 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Akt1s1Q9D1F4 257 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 ThegQ9JMB1 375 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Rag1P15919 1040 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Fig4Q91WF7 907 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pcdhgc5Q91XW9 944 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Itga9B8JK39 1036 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Zmym5Q3U2E2 627 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Glt8d2Q640P4 349 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Tmc3Q7TQ69 1130 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pcsk9Q80W65 694 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cpsf4Q8BQZ5 211 aaKnown RBP12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Zscan26Q5RJ54 466 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Retreg1dQ8VE91 480 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Kiaa2013Q91X21 634 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cmtr1Q9DBC3 837 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gm13941A2AJ38 245 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Xlr5bA2BI50 236 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gm5799E9Q2M1 201 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Surf2P09926 257 aaKnown RBP12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 AopepQ8BXQ6 817 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Olfr693Q8VF89 316 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cep97Q9CZ62 856 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Asap1Q9QWY8 1147 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 OplahQ8K010 1288 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Colgalt1Q8K297 617 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 PiguQ8K358 434 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Mtmr4Q91XS1 1190 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Vangl2Q91ZD4 521 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ddx28Q9CWT6 540 aaKnown RBP12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Adck1Q9D0L4 525 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Myo1hQ9D6A1 958 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Orc6Q9WUJ8 262 aa12.27□□□□□ -0.44
Trim56-201ENSMUST00000054384 Il1rl1P14719 567 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ppp1r14bQ62084 147 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Mfn2Q80U63 757 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pwp1Q99LL5 501 aaKnown RBP12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Dpy30Q99LT0 99 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Trmt11Q9CWH5 460 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 DmgdhQ9DBT9 869 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Smok2bQ9QYZ3 484 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Smok2aQ9QYZ6 504 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Mapk9Q9WTU6 423 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm5072A2AHM1 344 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Abhd12bG3UZN6 359 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Got1P05201 413 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Trappc3lQ4KL14 181 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pwp2Q8BU03 919 aaKnown RBP12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ndufs2Q91WD5 463 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Dlc1Q9R0Z9 1092 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tarbp1E9Q368 1579 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Atp9aO70228 1047 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Celf1P28659 486 aaKnown RBP12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gcnt1Q09324 428 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rabl6Q5U3K5 725 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 CtifQ6PEE2 600 aaKnown RBP12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ccdc32Q8BS39 179 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Kcnv1Q8BZN2 503 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Alg9Q8VDI9 611 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Med24Q99K74 987 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gsta1P13745 223 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pabpc1P29341 636 aaKnown RBP12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Sar1aP36536 198 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 GalcP54818 684 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Myl12bQ3THE2 172 aaKnown RBP12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Atp11bQ6DFW5 1175 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gsta1Q6P8Q0 223 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Abcg2Q7TMS5 657 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Chrna3Q8R4G9 499 aa12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tbrg4Q91YM4 630 aaKnown RBP12.27□□□□□ -0.45
Trim56-201ENSMUST00000054384 Grin3bQ91ZU9 1003 aa12.27□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms