RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Gm2832F7AEC7 200 aa12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Zfy1P10925 782 aa12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 UmpsP13439 481 aaKnown RBP12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Sipa1P46062 1037 aa12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Klrg2Q3UM83 387 aa12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Naif1Q6PFD7 327 aa12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Olfr389Q7TRX7 312 aa12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 AarsQ8BGQ7 968 aa12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 NcaphQ8C156 731 aa12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Snap47Q8R570 413 aa12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Habp4Q9JKS5 411 aaKnown RBP12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Atp6v1g2Q9WTT4 118 aa12.89□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm1141B9EJU1 475 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 PurbO35295 324 aaKnown RBP12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Itgb5O70309 798 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Rpl7aP12970 266 aaKnown RBP12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gnat1P20612 350 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 PctpP53808 214 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Sephs2P97364 452 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gpd1lQ3ULJ0 351 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Btbd10Q80X66 475 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Znf618Q80YY7 953 aaKnown RBP12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Olfr393Q8VGR6 312 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Sec14l2Q99J08 403 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Kif6E9PX57 802 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 D830030K20RikE9PYQ5 218 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm3043K7N693 218 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm16440K7N6G6 218 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm2244L7N2A3 218 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm3278L7N2D2 218 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm8271L7N2E2 218 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Glud1P26443 558 aaKnown RBP12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Cyp2c39P56656 490 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Tmc5Q32NZ6 967 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Mrgprx2Q3UG50 352 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Esyt3Q5DTI8 891 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Fbxw10Q5SUS0 1030 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 FAM120AQ6A0A9 1112 aaKnown RBP12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm5414Q6IFZ8 552 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Lrrc15Q80X72 579 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Shisa4Q8CA71 197 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Sugp1Q8CH02 643 aaKnown RBP12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Iqsec1Q8R0S2 961 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Vta1Q9CR26 309 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Slc25a13Q9QXX4 676 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Col16a1Q8BLX7 1580 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Slit3Q9WVB4 1523 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Cdh18E9Q9Q6 790 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Wnt10bP48614 389 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Map2k2Q63932 401 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Hmgb4Q6P8W9 181 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Cep72Q9D3R3 646 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Tnfaip8l2Q9D8Y7 184 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gtf2h1Q9DBA9 547 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ifi30Q9ESY9 248 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 XkQ9QXY7 446 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Pkp3Q9QY23 797 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm13941A2AJ38 245 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Zfp990B1AVN5 605 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 TriqkB2B9E1 86 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Arhgef26D3YYY8 869 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm5930D3Z257 264 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Zfp358E9Q8M1 571 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Mfsd4b4J3QNS5 503 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Mov10P23249 1004 aaKnown RBP12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Traf2P39429 501 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Cd86P42082 309 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 DselQ0VBN2 1207 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Tcaf3Q6QR59 914 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 SncaipQ99ME3 962 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Smad9Q9JIW5 430 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Htra2Q9JIY5 458 aa12.88□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm44511A0A0N4SW10 223 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ism1A2ATD1 454 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Zyg11aA2BFL2 627 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Smok3aC0HKC8 504 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Smok3bC0HKC9 504 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Mief2Q5NCS9 454 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Kcna5Q61762 602 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Slc47a1Q8K0H1 567 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Mageb3Q9D2H4 330 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Spag17Q5S003 2320 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Pnldc1B2RXZ1 531 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gm8879F6R3J9 157 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 AgxtO35423 414 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 ItgalP24063 1163 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 ZufspQ3T9Z9 577 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 TraddQ3U0V2 310 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Nat8lQ3UGX3 299 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 P3h1Q3V1T4 739 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Lcp1Q61233 627 aaKnown RBP12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Iars2Q8BIJ6 1012 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Tarsl2Q8BLY2 790 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Sh3kbp1Q8R550 709 aaKnown RBP12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Echdc3Q9D7J9 300 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Nlrp1bA1Z198 1177 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Pgk2P09041 417 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Q32P12 615 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Far2Q7TNT2 515 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Pgrmc2Q80UU9 217 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms