RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Klf1P46099 358 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gad2P48320 585 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Hsd17b2P51658 381 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Il1rapl1P59823 695 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Olfm3P63056 478 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 InhbaQ04998 424 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Prkaa1Q5EG47 559 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Itm2aQ61500 263 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Rnf139Q7TMV1 668 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Camta2Q80Y50 1208 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dusp4Q8BFV3 398 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 ScaiQ8C8N2 606 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Lin52Q8CD94 116 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Arhgap29Q8CGF1 1266 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Olfr449Q8VGW8 311 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Spns2Q91VM4 549 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Trex1Q91XB0 314 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Pdk3Q922H2 415 aaKnown RBP8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 AenQ9CZI9 336 aaKnown RBP8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nupr1Q9WTK0 80 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Zfc3h1B2RT41 1992 aaKnown RBP8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm29554A0A087WNW4 188 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 AspgA0JNU3 564 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm20721E9Q2U8 318 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm3460E9QAI8 215 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm21973F6WEZ7 68 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Chrnb1P09690 501 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cyth2P63034 400 aaKnown RBP8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 4933427I04RikQ3V053 235 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Mthfd1lQ3V3R1 977 aaKnown RBP8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Pik3r5Q5SW28 871 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Kpna1Q60960 538 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dsg1aQ61495 1057 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gpc5Q8CAL5 572 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 LzicQ8K3C3 190 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 OafQ8QZR4 282 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ap3m2Q8R2R9 418 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Def8Q99J78 448 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Sytl1Q99N80 567 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ift43Q9DA69 206 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ube4bQ9ES00 1173 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 C1qtnf1Q9QXP7 281 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Col1a1P11087 1453 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ttll6A4Q9E8 822 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Lipo2D3YY49 398 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ldlrad1D3YYZ1 218 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Olfr247E9PVJ7 320 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Vmn2r103E9PWW0 856 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Olfr819K7N727 320 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Serpinb9eO08806 377 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dhx15O35286 795 aaKnown RBP8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dnajb6O54946 365 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nptx2O70340 429 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Akap10O88845 662 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Crhr1P35347 415 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Mxi1P50540 228 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Scarf2P59222 833 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Polr2cP97760 275 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 4930430A15RikQ05AC5 485 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Patl1Q3TC46 770 aaKnown RBP8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Agap2Q3UHD9 1186 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 FaxcQ3UMF9 409 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Fam91a1Q3UVG3 837 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nqo1Q64669 274 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 OcrlQ6NVF0 900 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Fbxo10Q7TQF2 950 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Fcho1Q8K285 873 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Actr3Q99JY9 418 aaKnown RBP8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 TtpalQ9D3D0 343 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 TcimQ9D915 106 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Map3k14Q9WUL6 942 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Col2a1P28481 1487 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Arhgef37A1IGU4 676 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Prdm12A2AJ77 365 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Siah3B2RWG3 268 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cyp2a4P15392 494 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tph1P17532 447 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cyp2a5P20852 494 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Rasgrf1P27671 1262 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Prim2P33610 505 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Npas2P97460 816 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cdk7Q03147 346 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Runx2Q08775 607 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Hexim2Q3TVI4 313 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Naf1Q3UMQ8 489 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Rcsd1Q3UZA1 412 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Syn2Q64332 586 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dhx33Q80VY9 698 aaKnown RBP8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tasp1Q8R1G1 420 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 NelfcdQ922L6 591 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 NarfQ9CYQ7 462 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Adck1Q9D0L4 525 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Fam90a1bQ9D4F3 419 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Igdcc4Q9EQS9 1252 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Caln1Q9JJG7 219 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ptf1aQ9QX98 324 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Pmm2Q9Z2M7 242 aa8.56□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Smok3aC0HKC8 504 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Smok3bC0HKC9 504 aa8.55□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Farp1F8VPU2 1048 aa8.55□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms