RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Arhgap45Q3TBD2 1116 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Gpsm3Q3U1Z5 159 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Itih2Q61703 946 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Dpysl3Q62188 570 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Txndc8Q69AB2 127 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Taf5Q8C092 801 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Washc5Q8C2E7 1159 aaKnown RBP11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Btbd9Q8C726 612 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Trim32Q8CH72 655 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Il17cQ8K4C5 194 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 FdpsQ920E5 353 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Chaf1bQ9D0N7 572 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Lrrc71Q9D3W5 558 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 4930513O06RikQ9D549 161 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Cdyl2Q9D5D8 503 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 RalbQ9JIW9 206 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 C1qtnf1Q9QXP7 281 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Kif13bA0A286YCV9 1847 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Prdm12A2AJ77 365 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 CatspereP0DP43 985 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Coq7P97478 217 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 NfibP97863 570 aaKnown RBP11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 LvrnQ2KHK3 559 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Psd3Q2PFD7 1037 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Stip1Q60864 543 aaKnown RBP11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Rexo4Q6PAQ4 432 aaKnown RBP11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ccdc117Q6PB51 277 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 DaglaQ6WQJ1 1044 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Btnl1Q7TST0 509 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 IrgcQ8C262 412 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Zfp263Q8CF60 680 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Tp53bp2Q8CG79 1128 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Dapk2Q8VDF3 370 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Q91Z58 1206 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ddx50Q99MJ9 734 aaKnown RBP11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 MceeQ9D1I5 178 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Batf3Q9D275 118 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 IcmtQ9EQK7 283 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Prmt2Q9R144 448 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 MipepA6H611 711 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 F830016B08RikG3UWE2 416 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Kifc3O35231 824 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 PdgfaP20033 211 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Cbx3P23198 183 aaKnown RBP11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 PrkacbP68181 351 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Patl1Q3TC46 770 aaKnown RBP11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Fam172aQ3TNH5 417 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 1810065E05RikQ5NC41 235 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Creb3Q61817 404 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Olfr295Q7TS08 309 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Trnau1apQ80VC6 287 aaKnown RBP11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Pcdh20Q8BIZ0 952 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Snx16Q8C080 344 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Tlk1Q8C0V0 766 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 D630039A03RikQ8K0M7 236 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Rassf9Q8K342 435 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ska2Q9CR46 120 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 ParvaQ9EPC1 372 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 CtsrQ9JIA9 334 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 IqccA2ADZ8 418 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Dusp8O09112 663 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 PtgisO35074 501 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Dsg3O35902 993 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Prim2P33610 505 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 LipeP54310 759 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Rpl22P67984 128 aaKnown RBP11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Pcnx4Q3UVY5 1174 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 ADGRF3Q58Y75 991 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Fam169aQ5XG69 665 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Myl6Q60605 151 aaKnown RBP11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Grid1Q61627 1009 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Sema4aQ62178 760 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Capn3Q64691 821 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Dlgap3Q6PFD5 977 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Scaf4Q6PFF0 1209 aaKnown RBP11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Scfd1Q8BRF7 639 aaKnown RBP11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Pggt1bQ8BUY9 377 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 ItchQ8C863 864 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Klhl2Q8JZP3 593 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Acap1Q8K2H4 740 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Eva1bQ8K2Y3 164 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Olfr809Q8VEX8 328 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Olfr1499Q8VG65 314 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ppp1r3gQ9CW07 347 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 QpctQ9CYK2 362 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Mrpl4Q9DCU6 294 aaKnown RBP11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Myoz2Q9JJW5 264 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Neu2Q9JMH3 379 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Cib1Q9Z0F4 191 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Mapk13Q9Z1B7 366 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Abcb11Q9QY30 1321 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Wdr95D3Z7A8 784 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Sat1P48026 171 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Grid2ipQ0QWG9 1203 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Spink5Q148R4 1017 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Frmd8Q3UFK8 466 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Rbm44Q3V089 1013 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 2700097O09RikQ6PGK3 301 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Rfx4Q7TNK1 735 aa11.01□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Phf20Q8BLG0 1010 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms