RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 TgdsQ8VDR7 355 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ogfod2Q9CQ04 349 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cpne8Q9DC53 577 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Znhit2Q9QY66 399 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Nme3Q9WV85 169 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Plxnb2B2RXS4 1842 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Nrxn2E9Q7X7 1710 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Gm17535J3KMR8 224 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ptpn9O35239 593 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ift81O35594 676 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Serping1P97290 504 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Sdr16c6Q05A13 316 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Nt5dc3Q3UHB1 546 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tp53i13Q5F267 385 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Gucy2fQ5SDA5 1108 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 CttnQ60598 546 aaKnown RBP8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 StilQ60988 1262 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Stx3Q64704 289 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Scube3Q66PY1 993 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 PreplQ8C167 725 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Scara3Q8C850 606 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Serpinb10Q8K1K6 397 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Olfr615Q8VGY4 313 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Dnajc3Q91YW3 504 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slc39a3Q99K24 317 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Chst12Q99LL3 419 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Igf2bp3Q9CPN8 579 aaKnown RBP8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Micu3Q9CTY5 523 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 PmpcbQ9CXT8 489 aa8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Polr3hQ9D2C6 204 aaKnown RBP8.77□□□□□ -1
Sf3b1-201ENSMUST00000027127 Zfp990B1AVN5 605 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gm4846B2RWH8 538 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 ChrngP04760 519 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Sstr1P30873 391 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Btg3P50615 252 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 ItkQ03526 625 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 E330034G19RikQ3UWX6 351 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Orai2Q8BH10 250 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rsl1d1Q8BVY0 452 aaKnown RBP8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Proser2Q8C5R2 471 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gbp5Q8CFB4 590 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Dedd2Q8QZV0 330 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Itm2cQ91VK4 269 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Dnajc9Q91WN1 259 aaKnown RBP8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Decr1Q9CQ62 335 aaKnown RBP8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 BlvraQ9CY64 295 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Fam173bQ9D1Z3 247 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Dlgap1Q9D415 992 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ccdc103Q9D9P2 237 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Stx12Q9ER00 274 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gm6205E9PZS2 359 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Mroh4G3X8W1 983 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rpl21O09167 160 aaKnown RBP8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Micall2Q3TN34 1009 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Smcr8Q3UMB5 935 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Six1Q62231 284 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Inpp4bQ6P1Y8 924 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Lrrc4cQ8C031 640 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gm6367Q8C6L9 287 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Q8CCC3 530 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Vps39Q8R5L3 886 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Glra3Q91XP5 464 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Isl2Q9CXV0 359 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Lrrc71Q9D3W5 558 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Rnf225Q9D7D1 332 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ccdc70Q9D9B0 223 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Fzd9Q9R216 592 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gm15262A0A140LIQ5 728 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gm8113E0CXS8 587 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Tmigd3G3X8R9 209 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gm10250G3X9L6 160 aaKnown RBP8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Slc11a2P49282 568 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gabrb2P63137 512 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 GaaP70699 953 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 SPINDOCQ05AH6 381 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gm1587Q3UT80 123 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Ssxb5Q6XAS2 159 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Jade1Q6ZPI0 834 aaKnown RBP8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 ClmnQ8C5W0 1052 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Tmem82Q8R115 356 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Gins2Q9D600 185 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Atp5hQ9DCX2 161 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Copg2Q9QXK3 871 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Scn3aA2ASI5 1947 aa8.77□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Tac1P41539 130 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 CiitaP79621 1155 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Zbtb16Q3UQ17 673 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Zrsr1Q64707 428 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Akap7Q7TN79 314 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Cog2Q921L5 731 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Oma1Q9D8H7 521 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Capn7Q9R1S8 813 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 TfgQ9Z1A1 397 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Lilra5D3Z7A9 295 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Top6blJ3QMY9 579 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Slc27a2O35488 620 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 GscQ02591 256 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Pdss1Q33DR2 409 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Trmt1Q3TX08 663 aa8.76□□□□□ -1.01
Sf3b1-201ENSMUST00000027127 Zfp956Q3UZY6 572 aa8.76□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms