RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 GraspQ9JJA9 392 aa11.79□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Mbd1Q9Z2E2 636 aa11.79□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Krt16Q9Z2K1 469 aa11.79□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Nlrc5C3VPR6 1915 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Ralgapa2A3KGS3 1872 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Gm29554A0A087WNW4 188 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 PotegA5H0M4 473 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 D3Z070 196 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Srpk1O70551 648 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Cxcr2P35343 359 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Cyp2c38P56655 490 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Lrrn4P59383 733 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Mif4gdQ3UBZ5 222 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Trim38Q5SZ99 471 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Nlrp4fQ66X05 959 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Tas2r102Q7M717 329 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Celf6Q7TN33 460 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Znf276Q8CE64 614 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Ccdc28bQ8CEG5 200 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Sec63Q8VHE0 760 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 CarfQ8VHI4 689 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 AclyQ91V92 1091 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Dnajc9Q91WN1 259 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Bag2Q91YN9 210 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 NelfcdQ922L6 591 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Pgm1Q9D0F9 562 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Rmi1Q9D4G9 616 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Tspan17Q9D7W4 270 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Scyl1Q9EQC5 806 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Lama3Q61789 3330 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Ankfn1A0A140LIW7 1083 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Zfp651E9PZ11 729 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Dnase1l3O55070 310 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 GnazO70443 355 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Btg4O70552 250 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Myl4P09541 193 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 GlrbP48168 496 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 SftpbP50405 377 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 WasP70315 520 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Gspt2Q149F3 632 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Hace1Q3U0D9 909 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Nlrc4Q3UP24 1024 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 CttnQ60598 546 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 PrkciQ62074 595 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Klhl17Q6TDP3 640 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Ssxb5Q6XAS2 159 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Ddhd1Q80YA3 547 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Pum3Q8BKS9 647 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Ccdc68Q8BVC4 333 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Zbtb44Q8R0A2 453 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Q8VDP2 222 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Olfr1494Q8VGP8 315 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 YarsQ91WQ3 528 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Atad3Q925I1 591 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Gps1Q99LD4 471 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Pbx4Q99NE9 378 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Trem2Q99NH8 227 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 CoprsQ9CQ13 173 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Mrps9Q9D7N3 390 aaKnown RBP11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Vwa7Q9JHA8 891 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Dnajc12Q9R022 198 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Hao1Q9WU19 370 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Asb1Q9WV74 336 aa11.78□□□□□ -0.52
Ddx56-201ENSMUST00000004507 Col5a3Q9JLI2 1739 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Btnl4A2CG29 586 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Acp4D3YTS9 425 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Vmn2r104E9Q2J5 860 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Gm3415J3QMS8 315 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Nek2O35942 443 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Eef1bO70251 225 aaKnown RBP11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 MycP01108 439 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Chrna1P04756 457 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Vav1P27870 845 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Tap2P36371 702 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Gnl1P36916 607 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Shmt1P50431 478 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 YwhagP61982 247 aaKnown RBP11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Hoxb13P70321 286 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 InhbaQ04998 424 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Ripply1Q2WG77 201 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Stambpl1Q76N33 436 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Ube2q1Q7TSS2 422 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Znf598Q80YR4 908 aaKnown RBP11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Spata20Q80YT5 790 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Rhpn2Q8BWR8 686 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Slc15a5Q8CBB2 566 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Snrnp25Q8VIK1 123 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Hkdc1Q91W97 915 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Rnf112Q96DY5 654 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 HgsQ99LI8 775 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Rpa3Q9CQ71 121 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Tmed5Q9CXE7 229 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 MceeQ9D1I5 178 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Gm3404Q9D506 307 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Piwil1Q9JMB7 862 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Scn1aA2APX8 2009 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Dock3Q8CIQ7 2027 aa11.77□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Adamts9E9PUN6 1931 aa11.76□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Gm11985A0A1B0GS61 206 aa11.76□□□□□ -0.53
Ddx56-201ENSMUST00000004507 Tnfrsf14A0A1W2P7D5 276 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms